Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.17□□□□□ -1.42
VTA1Q9NP79 MTCO1P6-201ENST00000481192 1384 ntBASIC6.17□□□□□ -1.42
VTA1Q9NP79 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
VTA1Q9NP79 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
VTA1Q9NP79 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
VTA1Q9NP79 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.16□□□□□ -1.42
VTA1Q9NP79 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.16□□□□□ -1.42
VTA1Q9NP79 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VTA1Q9NP79 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
VTA1Q9NP79 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
VTA1Q9NP79 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
VTA1Q9NP79 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
VTA1Q9NP79 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
VTA1Q9NP79 RNA5SP305-201ENST00000362665 119 ntBASIC6.16□□□□□ -1.42
VTA1Q9NP79 RNU1-59P-201ENST00000364829 162 ntBASIC6.16□□□□□ -1.42
VTA1Q9NP79 RNU1-43P-201ENST00000365052 165 ntBASIC6.16□□□□□ -1.42
VTA1Q9NP79 RNU1-106P-201ENST00000384382 164 ntBASIC6.16□□□□□ -1.42
VTA1Q9NP79 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
VTA1Q9NP79 AL136131.1-201ENST00000406079 803 ntBASIC6.16□□□□□ -1.42
VTA1Q9NP79 DUTP5-201ENST00000406790 469 ntBASIC6.16□□□□□ -1.42
VTA1Q9NP79 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC6.16□□□□□ -1.42
VTA1Q9NP79 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.16□□□□□ -1.42
VTA1Q9NP79 RPL12P17-201ENST00000432393 498 ntBASIC6.16□□□□□ -1.42
VTA1Q9NP79 BX679664.2-201ENST00000439282 283 ntBASIC6.16□□□□□ -1.42
VTA1Q9NP79 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC6.16□□□□□ -1.42
VTA1Q9NP79 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC6.16□□□□□ -1.42
VTA1Q9NP79 VN1R40P-201ENST00000455196 941 ntBASIC6.16□□□□□ -1.42
VTA1Q9NP79 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.16□□□□□ -1.42
VTA1Q9NP79 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC6.16□□□□□ -1.42
VTA1Q9NP79 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC6.16□□□□□ -1.42
VTA1Q9NP79 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC6.16□□□□□ -1.42
VTA1Q9NP79 AC083923.1-201ENST00000523708 376 ntBASIC6.16□□□□□ -1.42
VTA1Q9NP79 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC6.16□□□□□ -1.42
VTA1Q9NP79 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC6.16□□□□□ -1.42
VTA1Q9NP79 MIR548Y-201ENST00000582739 110 ntBASIC6.16□□□□□ -1.42
VTA1Q9NP79 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC6.16□□□□□ -1.42
VTA1Q9NP79 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC6.16□□□□□ -1.42
VTA1Q9NP79 AC114878.2-201ENST00000604863 1251 ntBASIC6.16□□□□□ -1.42
VTA1Q9NP79 U1.25-201ENST00000614085 162 ntBASIC6.16□□□□□ -1.42
VTA1Q9NP79 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.16□□□□□ -1.42
VTA1Q9NP79 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.16□□□□□ -1.42
VTA1Q9NP79 AC090510.2-201ENST00000617465 629 ntBASIC6.16□□□□□ -1.42
VTA1Q9NP79 U1.31-201ENST00000620022 160 ntBASIC6.16□□□□□ -1.42
VTA1Q9NP79 AC022079.1-201ENST00000621546 602 ntBASIC6.16□□□□□ -1.42
VTA1Q9NP79 AL121594.5-201ENST00000631724 573 ntBASIC6.16□□□□□ -1.42
VTA1Q9NP79 LINC02211-204ENST00000642024 1070 ntBASIC6.16□□□□□ -1.42
VTA1Q9NP79 BX649567.1-201ENST00000642071 1134 ntBASIC6.16□□□□□ -1.42
VTA1Q9NP79 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.16□□□□□ -1.42
VTA1Q9NP79 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.16□□□□□ -1.42
VTA1Q9NP79 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
VTA1Q9NP79 OR55B1P-203ENST00000641518 2602 ntBASIC6.16□□□□□ -1.42
VTA1Q9NP79 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.16□□□□□ -1.42
VTA1Q9NP79 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
VTA1Q9NP79 CCT8P1-201ENST00000413611 1657 ntBASIC6.16□□□□□ -1.42
VTA1Q9NP79 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.16□□□□□ -1.42
VTA1Q9NP79 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.16□□□□□ -1.42
VTA1Q9NP79 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.16□□□□□ -1.42
VTA1Q9NP79 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VTA1Q9NP79 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
VTA1Q9NP79 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VTA1Q9NP79 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VTA1Q9NP79 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VTA1Q9NP79 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
VTA1Q9NP79 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
VTA1Q9NP79 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
VTA1Q9NP79 AC018809.2-201ENST00000602436 3823 ntBASIC6.15□□□□□ -1.42
VTA1Q9NP79 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
VTA1Q9NP79 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
VTA1Q9NP79 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
VTA1Q9NP79 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.15□□□□□ -1.42
VTA1Q9NP79 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
VTA1Q9NP79 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
VTA1Q9NP79 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
VTA1Q9NP79 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.15□□□□□ -1.42
VTA1Q9NP79 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
VTA1Q9NP79 AL645733.1-201ENST00000402250 217 ntBASIC6.15□□□□□ -1.42
VTA1Q9NP79 AC092745.2-202ENST00000411880 369 ntBASIC6.15□□□□□ -1.42
VTA1Q9NP79 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC6.15□□□□□ -1.42
VTA1Q9NP79 AL356320.2-201ENST00000417263 507 ntBASIC6.15□□□□□ -1.42
VTA1Q9NP79 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC6.15□□□□□ -1.42
VTA1Q9NP79 ZDHHC20P2-201ENST00000424108 429 ntBASIC6.15□□□□□ -1.42
VTA1Q9NP79 VN1R54P-201ENST00000435210 1049 ntBASIC6.15□□□□□ -1.42
VTA1Q9NP79 GAPDHP25-201ENST00000447061 1001 ntBASIC6.15□□□□□ -1.42
VTA1Q9NP79 AC005410.1-202ENST00000460347 485 ntBASIC6.15□□□□□ -1.42
VTA1Q9NP79 RPL7P40-201ENST00000481703 745 ntBASIC6.15□□□□□ -1.42
VTA1Q9NP79 RN7SL97P-201ENST00000486780 299 ntBASIC6.15□□□□□ -1.42
VTA1Q9NP79 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.15□□□□□ -1.42
VTA1Q9NP79 AC109462.1-201ENST00000491087 368 ntBASIC6.15□□□□□ -1.42
VTA1Q9NP79 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.15□□□□□ -1.42
VTA1Q9NP79 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC6.15□□□□□ -1.42
VTA1Q9NP79 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC6.15□□□□□ -1.42
VTA1Q9NP79 MTCO3P15-201ENST00000526563 574 ntBASIC6.15□□□□□ -1.42
VTA1Q9NP79 EMP1-206ENST00000537612 505 ntTSL 3 BASIC6.15□□□□□ -1.42
VTA1Q9NP79 OR11J2P-201ENST00000555298 907 ntBASIC6.15□□□□□ -1.42
VTA1Q9NP79 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC6.15□□□□□ -1.42
VTA1Q9NP79 NMNAT1P5-201ENST00000559657 841 ntBASIC6.15□□□□□ -1.42
VTA1Q9NP79 AP005403.1-201ENST00000579720 229 ntBASIC6.15□□□□□ -1.42
VTA1Q9NP79 AC006116.3-201ENST00000592968 361 ntBASIC6.15□□□□□ -1.42
VTA1Q9NP79 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.15□□□□□ -1.42
VTA1Q9NP79 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms