Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC020633.1-201ENST00000468439 2247 ntBASIC5.48□□□□□ -1.53
USP29Q9HBJ7 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.48□□□□□ -1.53
USP29Q9HBJ7 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
USP29Q9HBJ7 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
USP29Q9HBJ7 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
USP29Q9HBJ7 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.48□□□□□ -1.53
USP29Q9HBJ7 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
USP29Q9HBJ7 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
USP29Q9HBJ7 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.48□□□□□ -1.53
USP29Q9HBJ7 AL022311.1-201ENST00000623726 19416 ntBASIC5.48□□□□□ -1.53
USP29Q9HBJ7 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
USP29Q9HBJ7 OR9G4-201ENST00000302957 984 ntBASIC5.48□□□□□ -1.53
USP29Q9HBJ7 AC005294.1-201ENST00000355509 281 ntBASIC5.48□□□□□ -1.53
USP29Q9HBJ7 RNA5SP507-201ENST00000363603 121 ntBASIC5.48□□□□□ -1.53
USP29Q9HBJ7 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
USP29Q9HBJ7 GAPDHP15-201ENST00000398586 975 ntBASIC5.48□□□□□ -1.53
USP29Q9HBJ7 AL133270.1-201ENST00000402635 279 ntBASIC5.48□□□□□ -1.53
USP29Q9HBJ7 AL133388.1-201ENST00000404509 287 ntBASIC5.48□□□□□ -1.53
USP29Q9HBJ7 RNU2-22P-201ENST00000411266 212 ntBASIC5.48□□□□□ -1.53
USP29Q9HBJ7 RPL23AP27-201ENST00000415161 451 ntBASIC5.48□□□□□ -1.53
USP29Q9HBJ7 RPA2P2-201ENST00000419698 796 ntBASIC5.48□□□□□ -1.53
USP29Q9HBJ7 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC5.48□□□□□ -1.53
USP29Q9HBJ7 AC006065.1-201ENST00000422539 802 ntBASIC5.48□□□□□ -1.53
USP29Q9HBJ7 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
USP29Q9HBJ7 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.48□□□□□ -1.53
USP29Q9HBJ7 RPL7L1P9-201ENST00000431298 745 ntBASIC5.48□□□□□ -1.53
USP29Q9HBJ7 MTCO2P20-201ENST00000437339 673 ntBASIC5.48□□□□□ -1.53
USP29Q9HBJ7 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC5.48□□□□□ -1.53
USP29Q9HBJ7 TCEA1P3-201ENST00000443005 880 ntBASIC5.48□□□□□ -1.53
USP29Q9HBJ7 AC069540.1-201ENST00000446320 988 ntBASIC5.48□□□□□ -1.53
USP29Q9HBJ7 CYCSP42-201ENST00000450823 238 ntBASIC5.48□□□□□ -1.53
USP29Q9HBJ7 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC5.48□□□□□ -1.53
USP29Q9HBJ7 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.48□□□□□ -1.53
USP29Q9HBJ7 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.48□□□□□ -1.53
USP29Q9HBJ7 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.48□□□□□ -1.53
USP29Q9HBJ7 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.48□□□□□ -1.53
USP29Q9HBJ7 AC022360.1-201ENST00000521058 340 ntBASIC5.48□□□□□ -1.53
USP29Q9HBJ7 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
USP29Q9HBJ7 HMGN2P6-201ENST00000551091 273 ntBASIC5.48□□□□□ -1.53
USP29Q9HBJ7 MTCYBP23-201ENST00000558717 1102 ntBASIC5.48□□□□□ -1.53
USP29Q9HBJ7 AC040958.1-201ENST00000561102 201 ntBASIC5.48□□□□□ -1.53
USP29Q9HBJ7 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.48□□□□□ -1.53
USP29Q9HBJ7 FAM106CP-201ENST00000582212 507 ntBASIC5.48□□□□□ -1.53
USP29Q9HBJ7 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.48□□□□□ -1.53
USP29Q9HBJ7 AC068020.1-201ENST00000594215 661 ntBASIC5.48□□□□□ -1.53
USP29Q9HBJ7 AC130352.1-201ENST00000602979 661 ntBASIC5.48□□□□□ -1.53
USP29Q9HBJ7 AC009027.1-201ENST00000604510 479 ntBASIC5.48□□□□□ -1.53
USP29Q9HBJ7 AL162431.4-201ENST00000604674 411 ntBASIC5.48□□□□□ -1.53
USP29Q9HBJ7 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.48□□□□□ -1.53
USP29Q9HBJ7 AL355493.4-201ENST00000618530 292 ntBASIC5.48□□□□□ -1.53
USP29Q9HBJ7 AL035461.2-201ENST00000619201 524 ntBASIC5.48□□□□□ -1.53
USP29Q9HBJ7 AC105105.5-201ENST00000622635 1294 ntBASIC5.48□□□□□ -1.53
USP29Q9HBJ7 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.48□□□□□ -1.53
USP29Q9HBJ7 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
USP29Q9HBJ7 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
USP29Q9HBJ7 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.48□□□□□ -1.53
USP29Q9HBJ7 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.48□□□□□ -1.53
USP29Q9HBJ7 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
USP29Q9HBJ7 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.48□□□□□ -1.53
USP29Q9HBJ7 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
USP29Q9HBJ7 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
USP29Q9HBJ7 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
USP29Q9HBJ7 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.48□□□□□ -1.53
USP29Q9HBJ7 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
USP29Q9HBJ7 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
USP29Q9HBJ7 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.47□□□□□ -1.53
USP29Q9HBJ7 ZNF733P-202ENST00000444809 1573 ntBASIC5.47□□□□□ -1.53
USP29Q9HBJ7 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
USP29Q9HBJ7 ADAM5-202ENST00000399789 1942 ntBASIC5.47□□□□□ -1.53
USP29Q9HBJ7 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
USP29Q9HBJ7 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.47□□□□□ -1.53
USP29Q9HBJ7 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
USP29Q9HBJ7 RNU6-729P-201ENST00000384399 107 ntBASIC5.47□□□□□ -1.53
USP29Q9HBJ7 RPL12P9-201ENST00000412942 488 ntBASIC5.47□□□□□ -1.53
USP29Q9HBJ7 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.47□□□□□ -1.53
USP29Q9HBJ7 HIGD1AP15-201ENST00000416198 280 ntBASIC5.47□□□□□ -1.53
USP29Q9HBJ7 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.47□□□□□ -1.53
USP29Q9HBJ7 NDUFA5P10-201ENST00000432147 357 ntBASIC5.47□□□□□ -1.53
USP29Q9HBJ7 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.47□□□□□ -1.53
USP29Q9HBJ7 HMGB3P10-201ENST00000434734 572 ntBASIC5.47□□□□□ -1.53
USP29Q9HBJ7 GAPDHP25-201ENST00000447061 1001 ntBASIC5.47□□□□□ -1.53
USP29Q9HBJ7 PRPF38AP1-201ENST00000451976 933 ntBASIC5.47□□□□□ -1.53
USP29Q9HBJ7 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.47□□□□□ -1.53
USP29Q9HBJ7 MTCO3P35-201ENST00000485582 781 ntBASIC5.47□□□□□ -1.53
USP29Q9HBJ7 COX6B1P2-201ENST00000489624 230 ntBASIC5.47□□□□□ -1.53
USP29Q9HBJ7 AC069304.1-201ENST00000491593 704 ntBASIC5.47□□□□□ -1.53
USP29Q9HBJ7 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.47□□□□□ -1.53
USP29Q9HBJ7 ENPP7P11-201ENST00000505915 627 ntBASIC5.47□□□□□ -1.53
USP29Q9HBJ7 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.47□□□□□ -1.53
USP29Q9HBJ7 AC147055.3-201ENST00000510547 851 ntBASIC5.47□□□□□ -1.53
USP29Q9HBJ7 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
USP29Q9HBJ7 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.47□□□□□ -1.53
USP29Q9HBJ7 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.47□□□□□ -1.53
USP29Q9HBJ7 AC022832.1-201ENST00000530718 645 ntBASIC5.47□□□□□ -1.53
USP29Q9HBJ7 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
USP29Q9HBJ7 BLZF2P-201ENST00000553776 1130 ntBASIC5.47□□□□□ -1.53
USP29Q9HBJ7 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.47□□□□□ -1.53
USP29Q9HBJ7 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.47□□□□□ -1.53
USP29Q9HBJ7 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.47□□□□□ -1.53
USP29Q9HBJ7 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms