Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC090568.1-201ENST00000509499 856 ntBASIC5.06□□□□□ -1.6
BRF2Q9HAW0 RNU6-347P-201ENST00000516658 105 ntBASIC5.06□□□□□ -1.6
BRF2Q9HAW0 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.06□□□□□ -1.6
BRF2Q9HAW0 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.06□□□□□ -1.6
BRF2Q9HAW0 MTND1P6-201ENST00000523621 946 ntBASIC5.06□□□□□ -1.6
BRF2Q9HAW0 AC083923.1-201ENST00000523708 376 ntBASIC5.06□□□□□ -1.6
BRF2Q9HAW0 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
BRF2Q9HAW0 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
BRF2Q9HAW0 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.06□□□□□ -1.6
BRF2Q9HAW0 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.06□□□□□ -1.6
BRF2Q9HAW0 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
BRF2Q9HAW0 RBM22P1-201ENST00000578589 1214 ntBASIC5.06□□□□□ -1.6
BRF2Q9HAW0 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.06□□□□□ -1.6
BRF2Q9HAW0 AC090312.2-201ENST00000582687 378 ntBASIC5.06□□□□□ -1.6
BRF2Q9HAW0 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.06□□□□□ -1.6
BRF2Q9HAW0 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.06□□□□□ -1.6
BRF2Q9HAW0 AC010503.3-201ENST00000594355 540 ntBASIC5.06□□□□□ -1.6
BRF2Q9HAW0 EIF1P6-201ENST00000600054 334 ntBASIC5.06□□□□□ -1.6
BRF2Q9HAW0 AC026979.4-201ENST00000606555 645 ntBASIC5.06□□□□□ -1.6
BRF2Q9HAW0 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
BRF2Q9HAW0 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC5.06□□□□□ -1.6
BRF2Q9HAW0 AC116563.2-201ENST00000624751 535 ntBASIC5.06□□□□□ -1.6
BRF2Q9HAW0 CDRT1-208ENST00000630868 794 ntBASIC5.06□□□□□ -1.6
BRF2Q9HAW0 FRG1EP-201ENST00000634469 770 ntBASIC5.06□□□□□ -1.6
BRF2Q9HAW0 U6.107-201ENST00000637108 79 ntBASIC5.06□□□□□ -1.6
BRF2Q9HAW0 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC5.06□□□□□ -1.6
BRF2Q9HAW0 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
BRF2Q9HAW0 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
BRF2Q9HAW0 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
BRF2Q9HAW0 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
BRF2Q9HAW0 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
BRF2Q9HAW0 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
BRF2Q9HAW0 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
BRF2Q9HAW0 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
BRF2Q9HAW0 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
BRF2Q9HAW0 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
BRF2Q9HAW0 AC073055.1-201ENST00000456901 1621 ntBASIC5.05□□□□□ -1.6
BRF2Q9HAW0 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
BRF2Q9HAW0 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
BRF2Q9HAW0 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
BRF2Q9HAW0 SMG1P6-201ENST00000532337 2930 ntBASIC5.05□□□□□ -1.6
BRF2Q9HAW0 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
BRF2Q9HAW0 AC022031.1-201ENST00000585985 2593 ntBASIC5.05□□□□□ -1.6
BRF2Q9HAW0 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
BRF2Q9HAW0 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
BRF2Q9HAW0 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC5.05□□□□□ -1.6
BRF2Q9HAW0 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
BRF2Q9HAW0 MIR122-201ENST00000385044 85 ntBASIC5.05□□□□□ -1.6
BRF2Q9HAW0 RNA5SP339-201ENST00000390987 122 ntBASIC5.05□□□□□ -1.6
BRF2Q9HAW0 OR8V1P-201ENST00000395193 873 ntBASIC5.05□□□□□ -1.6
BRF2Q9HAW0 OR4K12P-201ENST00000406538 961 ntBASIC5.05□□□□□ -1.6
BRF2Q9HAW0 MTND4P11-201ENST00000417020 1058 ntBASIC5.05□□□□□ -1.6
BRF2Q9HAW0 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.05□□□□□ -1.6
BRF2Q9HAW0 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.05□□□□□ -1.6
BRF2Q9HAW0 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.05□□□□□ -1.6
BRF2Q9HAW0 OR5AW1P-201ENST00000426334 1006 ntBASIC5.05□□□□□ -1.6
BRF2Q9HAW0 AC073069.1-201ENST00000428657 441 ntBASIC5.05□□□□□ -1.6
BRF2Q9HAW0 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.05□□□□□ -1.6
BRF2Q9HAW0 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.05□□□□□ -1.6
BRF2Q9HAW0 AL138899.2-201ENST00000439139 499 ntBASIC5.05□□□□□ -1.6
BRF2Q9HAW0 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.05□□□□□ -1.6
BRF2Q9HAW0 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.05□□□□□ -1.6
BRF2Q9HAW0 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.05□□□□□ -1.6
BRF2Q9HAW0 MTND2P8-201ENST00000450555 1025 ntBASIC5.05□□□□□ -1.6
BRF2Q9HAW0 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
BRF2Q9HAW0 AC104634.1-201ENST00000452720 462 ntBASIC5.05□□□□□ -1.6
BRF2Q9HAW0 RPL12P24-201ENST00000474907 486 ntBASIC5.05□□□□□ -1.6
BRF2Q9HAW0 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.05□□□□□ -1.6
BRF2Q9HAW0 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.05□□□□□ -1.6
BRF2Q9HAW0 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.05□□□□□ -1.6
BRF2Q9HAW0 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.05□□□□□ -1.6
BRF2Q9HAW0 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC5.05□□□□□ -1.6
BRF2Q9HAW0 AC008565.1-201ENST00000509046 885 ntBASIC5.05□□□□□ -1.6
BRF2Q9HAW0 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.05□□□□□ -1.6
BRF2Q9HAW0 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.05□□□□□ -1.6
BRF2Q9HAW0 IGKV2-36-201ENST00000519999 223 ntBASIC5.05□□□□□ -1.6
BRF2Q9HAW0 AC010306.1-201ENST00000523223 1117 ntBASIC5.05□□□□□ -1.6
BRF2Q9HAW0 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.05□□□□□ -1.6
BRF2Q9HAW0 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.05□□□□□ -1.6
BRF2Q9HAW0 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC5.05□□□□□ -1.6
BRF2Q9HAW0 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
BRF2Q9HAW0 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.05□□□□□ -1.6
BRF2Q9HAW0 AC019322.1-201ENST00000571869 389 ntBASIC5.05□□□□□ -1.6
BRF2Q9HAW0 AC127024.5-201ENST00000580085 462 ntBASIC5.05□□□□□ -1.6
BRF2Q9HAW0 MIR3614-201ENST00000581261 86 ntBASIC5.05□□□□□ -1.6
BRF2Q9HAW0 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC5.05□□□□□ -1.6
BRF2Q9HAW0 AC008814.1-201ENST00000603797 406 ntBASIC5.05□□□□□ -1.6
BRF2Q9HAW0 SUGT1P3-202ENST00000604259 383 ntBASIC5.05□□□□□ -1.6
BRF2Q9HAW0 AC010200.2-201ENST00000605098 235 ntBASIC5.05□□□□□ -1.6
BRF2Q9HAW0 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.05□□□□□ -1.6
BRF2Q9HAW0 AL355816.1-201ENST00000607951 118 ntBASIC5.05□□□□□ -1.6
BRF2Q9HAW0 AC015982.1-201ENST00000608113 465 ntBASIC5.05□□□□□ -1.6
BRF2Q9HAW0 AC010608.3-201ENST00000625048 527 ntBASIC5.05□□□□□ -1.6
BRF2Q9HAW0 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.05□□□□□ -1.6
BRF2Q9HAW0 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.05□□□□□ -1.6
BRF2Q9HAW0 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
BRF2Q9HAW0 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
BRF2Q9HAW0 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.05□□□□□ -1.6
BRF2Q9HAW0 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
BRF2Q9HAW0 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms