Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SHANK3Q9BYB0 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SHANK3Q9BYB0 RNU1-132P-201ENST00000364300 164 ntBASIC5.84□□□□□ -1.47
SHANK3Q9BYB0 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.84□□□□□ -1.47
SHANK3Q9BYB0 GOT2P5-201ENST00000433995 546 ntBASIC5.84□□□□□ -1.47
SHANK3Q9BYB0 AC009963.4-201ENST00000448535 339 ntBASIC5.84□□□□□ -1.47
SHANK3Q9BYB0 RPL7P49-201ENST00000471402 708 ntBASIC5.84□□□□□ -1.47
SHANK3Q9BYB0 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.84□□□□□ -1.47
SHANK3Q9BYB0 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.84□□□□□ -1.47
SHANK3Q9BYB0 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.84□□□□□ -1.47
SHANK3Q9BYB0 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.84□□□□□ -1.47
SHANK3Q9BYB0 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.84□□□□□ -1.47
SHANK3Q9BYB0 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.84□□□□□ -1.47
SHANK3Q9BYB0 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.84□□□□□ -1.47
SHANK3Q9BYB0 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.84□□□□□ -1.47
SHANK3Q9BYB0 AC015804.1-201ENST00000622935 435 ntBASIC5.84□□□□□ -1.47
SHANK3Q9BYB0 CDRT1-208ENST00000630868 794 ntBASIC5.84□□□□□ -1.47
SHANK3Q9BYB0 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SHANK3Q9BYB0 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SHANK3Q9BYB0 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SHANK3Q9BYB0 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SHANK3Q9BYB0 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHANK3Q9BYB0 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHANK3Q9BYB0 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SHANK3Q9BYB0 Y_RNA.111-201ENST00000363248 100 ntBASIC5.83□□□□□ -1.48
SHANK3Q9BYB0 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.83□□□□□ -1.48
SHANK3Q9BYB0 AC104651.2-201ENST00000447549 528 ntBASIC5.83□□□□□ -1.48
SHANK3Q9BYB0 RPS7P7-201ENST00000463499 571 ntBASIC5.83□□□□□ -1.48
SHANK3Q9BYB0 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.83□□□□□ -1.48
SHANK3Q9BYB0 AC146944.2-203ENST00000502493 354 ntBASIC5.83□□□□□ -1.48
SHANK3Q9BYB0 AC139495.1-202ENST00000513164 354 ntBASIC5.83□□□□□ -1.48
SHANK3Q9BYB0 AC108064.1-201ENST00000513791 460 ntBASIC5.83□□□□□ -1.48
SHANK3Q9BYB0 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.83□□□□□ -1.48
SHANK3Q9BYB0 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.83□□□□□ -1.48
SHANK3Q9BYB0 AP001804.2-201ENST00000533932 910 ntBASIC5.83□□□□□ -1.48
SHANK3Q9BYB0 PSMB7P1-201ENST00000556349 514 ntBASIC5.83□□□□□ -1.48
SHANK3Q9BYB0 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.83□□□□□ -1.48
SHANK3Q9BYB0 uc_338.13-201ENST00000618243 179 ntBASIC5.83□□□□□ -1.48
SHANK3Q9BYB0 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHANK3Q9BYB0 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHANK3Q9BYB0 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SHANK3Q9BYB0 AC018628.1-201ENST00000624147 3819 ntBASIC5.83□□□□□ -1.48
SHANK3Q9BYB0 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
SHANK3Q9BYB0 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
SHANK3Q9BYB0 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.83□□□□□ -1.48
SHANK3Q9BYB0 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHANK3Q9BYB0 MAPK10-328ENST00000641553 4009 ntBASIC5.83□□□□□ -1.48
SHANK3Q9BYB0 AC233968.1-201ENST00000611212 1300 ntBASIC5.83□□□□□ -1.48
SHANK3Q9BYB0 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 SNRPFP1-201ENST00000414761 252 ntBASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 AL445584.1-201ENST00000431451 330 ntBASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 RPL35AP21-201ENST00000437667 333 ntBASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 AC084757.4-201ENST00000616350 526 ntBASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 AC015722.2-201ENST00000622210 551 ntBASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 AC105074.1-201ENST00000623380 3095 ntBASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 AC099654.3-201ENST00000447087 1546 ntBASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 AL360270.2-201ENST00000562952 5985 ntBASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 Z98745.1-201ENST00000402553 494 ntBASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 AC104333.2-201ENST00000422630 192 ntBASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 AC006326.1-201ENST00000445465 787 ntBASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 AL049874.2-201ENST00000492636 288 ntBASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 RPS27AP13-201ENST00000498403 237 ntBASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 AC110768.1-201ENST00000509222 400 ntBASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 NPM1P41-201ENST00000512920 831 ntBASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 AC105233.3-201ENST00000531125 744 ntBASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 AC012314.7-201ENST00000619693 93 ntBASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 AL357559.1-201ENST00000622228 274 ntBASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 MR1-209ENST00000617803 7584 ntTSL 5 BASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
SHANK3Q9BYB0 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHANK3Q9BYB0 CASC19-206ENST00000641028 1430 ntBASIC5.81□□□□□ -1.48
SHANK3Q9BYB0 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.81□□□□□ -1.48
SHANK3Q9BYB0 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms