Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SMOQ99835 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SMOQ99835 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SMOQ99835 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SMOQ99835 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SMOQ99835 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SMOQ99835 RNU1-146P-201ENST00000364015 165 ntBASIC5.62□□□□□ -1.51
SMOQ99835 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.62□□□□□ -1.51
SMOQ99835 MIR142-201ENST00000384835 87 ntBASIC5.62□□□□□ -1.51
SMOQ99835 MIR223-201ENST00000385204 110 ntBASIC5.62□□□□□ -1.51
SMOQ99835 SKINT1L-201ENST00000401057 817 ntBASIC5.62□□□□□ -1.51
SMOQ99835 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.62□□□□□ -1.51
SMOQ99835 DPPA2P3-201ENST00000411853 655 ntBASIC5.62□□□□□ -1.51
SMOQ99835 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.62□□□□□ -1.51
SMOQ99835 AC093655.2-201ENST00000425735 631 ntBASIC5.62□□□□□ -1.51
SMOQ99835 AL139148.1-201ENST00000427122 680 ntBASIC5.62□□□□□ -1.51
SMOQ99835 FO393419.3-201ENST00000428741 282 ntBASIC5.62□□□□□ -1.51
SMOQ99835 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.62□□□□□ -1.51
SMOQ99835 AC097499.1-201ENST00000444277 208 ntBASIC5.62□□□□□ -1.51
SMOQ99835 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.62□□□□□ -1.51
SMOQ99835 PTENP1-201ENST00000447117 1215 ntBASIC5.62□□□□□ -1.51
SMOQ99835 FAR2P1-206ENST00000449736 709 ntBASIC5.62□□□□□ -1.51
SMOQ99835 RPL7P32-201ENST00000457119 744 ntBASIC5.62□□□□□ -1.51
SMOQ99835 AC010468.1-201ENST00000461022 817 ntBASIC5.62□□□□□ -1.51
SMOQ99835 RN7SL197P-201ENST00000466981 299 ntBASIC5.62□□□□□ -1.51
SMOQ99835 CR383656.1-201ENST00000484916 377 ntBASIC5.62□□□□□ -1.51
SMOQ99835 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.62□□□□□ -1.51
SMOQ99835 IGBP1P4-201ENST00000503202 879 ntBASIC5.62□□□□□ -1.51
SMOQ99835 AC034244.1-201ENST00000507687 207 ntBASIC5.62□□□□□ -1.51
SMOQ99835 AC021193.1-201ENST00000511607 420 ntBASIC5.62□□□□□ -1.51
SMOQ99835 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.62□□□□□ -1.51
SMOQ99835 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.62□□□□□ -1.51
SMOQ99835 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.62□□□□□ -1.51
SMOQ99835 RN7SKP34-201ENST00000516142 244 ntBASIC5.62□□□□□ -1.51
SMOQ99835 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.62□□□□□ -1.51
SMOQ99835 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.62□□□□□ -1.51
SMOQ99835 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC5.62□□□□□ -1.51
SMOQ99835 AC125611.1-201ENST00000549563 229 ntBASIC5.62□□□□□ -1.51
SMOQ99835 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.62□□□□□ -1.51
SMOQ99835 AL049870.4-201ENST00000555741 486 ntBASIC5.62□□□□□ -1.51
SMOQ99835 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.62□□□□□ -1.51
SMOQ99835 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SMOQ99835 AC010503.3-201ENST00000594355 540 ntBASIC5.62□□□□□ -1.51
SMOQ99835 AC015726.1-201ENST00000602353 681 ntBASIC5.62□□□□□ -1.51
SMOQ99835 AC013468.1-201ENST00000608680 598 ntBASIC5.62□□□□□ -1.51
SMOQ99835 AC126915.2-201ENST00000610957 190 ntBASIC5.62□□□□□ -1.51
SMOQ99835 AC090527.3-201ENST00000619041 548 ntBASIC5.62□□□□□ -1.51
SMOQ99835 AP002505.2-201ENST00000623585 696 ntBASIC5.62□□□□□ -1.51
SMOQ99835 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.62□□□□□ -1.51
SMOQ99835 AL513185.3-201ENST00000433335 1300 ntBASIC5.62□□□□□ -1.51
SMOQ99835 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.62□□□□□ -1.51
SMOQ99835 MTND4P10-201ENST00000446199 1363 ntBASIC5.62□□□□□ -1.51
SMOQ99835 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
SMOQ99835 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SMOQ99835 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SMOQ99835 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SMOQ99835 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
SMOQ99835 AC020633.1-201ENST00000468439 2247 ntBASIC5.62□□□□□ -1.51
SMOQ99835 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
SMOQ99835 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
SMOQ99835 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SMOQ99835 AL360270.2-201ENST00000562952 5985 ntBASIC5.61□□□□□ -1.51
SMOQ99835 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SMOQ99835 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SMOQ99835 RNA5SP27-201ENST00000363839 119 ntBASIC5.61□□□□□ -1.51
SMOQ99835 RNU1-43P-201ENST00000365052 165 ntBASIC5.61□□□□□ -1.51
SMOQ99835 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SMOQ99835 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.61□□□□□ -1.51
SMOQ99835 MTCO1P56-201ENST00000401674 224 ntBASIC5.61□□□□□ -1.51
SMOQ99835 HSPA8P15-201ENST00000401676 786 ntBASIC5.61□□□□□ -1.51
SMOQ99835 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
SMOQ99835 RN7SKP273-201ENST00000411392 314 ntBASIC5.61□□□□□ -1.51
SMOQ99835 AC246680.2-201ENST00000422106 389 ntBASIC5.61□□□□□ -1.51
SMOQ99835 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.61□□□□□ -1.51
SMOQ99835 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.61□□□□□ -1.51
SMOQ99835 HIGD1AP12-201ENST00000427832 281 ntBASIC5.61□□□□□ -1.51
SMOQ99835 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.61□□□□□ -1.51
SMOQ99835 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.61□□□□□ -1.51
SMOQ99835 HMGB3P6-201ENST00000444896 598 ntBASIC5.61□□□□□ -1.51
SMOQ99835 AC023271.1-201ENST00000445936 1090 ntBASIC5.61□□□□□ -1.51
SMOQ99835 DDX18P6-201ENST00000450119 1997 ntBASIC5.61□□□□□ -1.51
SMOQ99835 CALM1P2-201ENST00000452941 448 ntBASIC5.61□□□□□ -1.51
SMOQ99835 ART2BP-201ENST00000453501 499 ntBASIC5.61□□□□□ -1.51
SMOQ99835 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.61□□□□□ -1.51
SMOQ99835 HSPE1P22-201ENST00000456856 327 ntBASIC5.61□□□□□ -1.51
SMOQ99835 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.61□□□□□ -1.51
SMOQ99835 AC005532.2-201ENST00000467154 373 ntBASIC5.61□□□□□ -1.51
SMOQ99835 BET1P1-201ENST00000482276 359 ntBASIC5.61□□□□□ -1.51
SMOQ99835 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.61□□□□□ -1.51
SMOQ99835 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.61□□□□□ -1.51
SMOQ99835 HMGN1P9-201ENST00000515212 298 ntBASIC5.61□□□□□ -1.51
SMOQ99835 SNORA3.4-201ENST00000515969 96 ntBASIC5.61□□□□□ -1.51
SMOQ99835 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC5.61□□□□□ -1.51
SMOQ99835 AL356057.1-201ENST00000533798 831 ntBASIC5.61□□□□□ -1.51
SMOQ99835 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC5.61□□□□□ -1.51
SMOQ99835 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.61□□□□□ -1.51
SMOQ99835 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC5.61□□□□□ -1.51
SMOQ99835 AC007448.1-201ENST00000582714 234 ntBASIC5.61□□□□□ -1.51
SMOQ99835 AC015688.2-201ENST00000584523 262 ntBASIC5.61□□□□□ -1.51
SMOQ99835 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms