Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC7.45□□□□□ -1.22
IFT140Q96RY7 TCEA1P3-201ENST00000443005 880 ntBASIC7.45□□□□□ -1.22
IFT140Q96RY7 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC7.45□□□□□ -1.22
IFT140Q96RY7 DYNLL1P4-201ENST00000549314 266 ntBASIC7.45□□□□□ -1.22
IFT140Q96RY7 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
IFT140Q96RY7 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC7.45□□□□□ -1.22
IFT140Q96RY7 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
IFT140Q96RY7 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
IFT140Q96RY7 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC7.45□□□□□ -1.22
IFT140Q96RY7 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
IFT140Q96RY7 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC7.45□□□□□ -1.22
IFT140Q96RY7 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC7.45□□□□□ -1.22
IFT140Q96RY7 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
IFT140Q96RY7 NOL8P1-201ENST00000508336 3529 ntBASIC7.44□□□□□ -1.22
IFT140Q96RY7 SNRPFP1-201ENST00000414761 252 ntBASIC7.44□□□□□ -1.22
IFT140Q96RY7 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC7.44□□□□□ -1.22
IFT140Q96RY7 GOT2P5-201ENST00000433995 546 ntBASIC7.44□□□□□ -1.22
IFT140Q96RY7 TRIM36-IT1-201ENST00000503723 881 ntBASIC7.44□□□□□ -1.22
IFT140Q96RY7 RNA5SP49-201ENST00000516450 115 ntBASIC7.44□□□□□ -1.22
IFT140Q96RY7 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC7.44□□□□□ -1.22
IFT140Q96RY7 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC7.44□□□□□ -1.22
IFT140Q96RY7 IGKV2OR2-2-201ENST00000605025 300 ntBASIC7.44□□□□□ -1.22
IFT140Q96RY7 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
IFT140Q96RY7 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
IFT140Q96RY7 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
IFT140Q96RY7 RLIMP1-201ENST00000339626 1680 ntBASIC7.44□□□□□ -1.22
IFT140Q96RY7 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC7.43□□□□□ -1.22
IFT140Q96RY7 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
IFT140Q96RY7 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
IFT140Q96RY7 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
IFT140Q96RY7 MIR3065-201ENST00000390137 79 ntBASIC7.43□□□□□ -1.22
IFT140Q96RY7 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC7.43□□□□□ -1.22
IFT140Q96RY7 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC7.43□□□□□ -1.22
IFT140Q96RY7 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC7.43□□□□□ -1.22
IFT140Q96RY7 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC7.43□□□□□ -1.22
IFT140Q96RY7 AC010460.1-201ENST00000507087 466 ntBASIC7.43□□□□□ -1.22
IFT140Q96RY7 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC7.43□□□□□ -1.22
IFT140Q96RY7 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC7.43□□□□□ -1.22
IFT140Q96RY7 AC079587.1-201ENST00000603846 277 ntBASIC7.43□□□□□ -1.22
IFT140Q96RY7 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
IFT140Q96RY7 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC7.43□□□□□ -1.22
IFT140Q96RY7 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
IFT140Q96RY7 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
IFT140Q96RY7 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC7.43□□□□□ -1.22
IFT140Q96RY7 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
IFT140Q96RY7 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
IFT140Q96RY7 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
IFT140Q96RY7 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
IFT140Q96RY7 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
IFT140Q96RY7 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
IFT140Q96RY7 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
IFT140Q96RY7 RGS17P1-201ENST00000423358 553 ntBASIC7.43□□□□□ -1.22
IFT140Q96RY7 OR8F1P-201ENST00000425243 930 ntBASIC7.43□□□□□ -1.22
IFT140Q96RY7 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC7.43□□□□□ -1.22
IFT140Q96RY7 AC114495.1-201ENST00000441274 436 ntBASIC7.43□□□□□ -1.22
IFT140Q96RY7 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC7.43□□□□□ -1.22
IFT140Q96RY7 AL157884.3-201ENST00000448273 1184 ntBASIC7.43□□□□□ -1.22
IFT140Q96RY7 NPM1P21-201ENST00000513394 762 ntBASIC7.43□□□□□ -1.22
IFT140Q96RY7 TRMT10BP1-201ENST00000519377 943 ntBASIC7.43□□□□□ -1.22
IFT140Q96RY7 IFITM8P-201ENST00000522529 394 ntBASIC7.43□□□□□ -1.22
IFT140Q96RY7 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC7.43□□□□□ -1.22
IFT140Q96RY7 FAM27D1-201ENST00000612308 341 ntBASIC7.43□□□□□ -1.22
IFT140Q96RY7 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC7.42□□□□□ -1.22
IFT140Q96RY7 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
IFT140Q96RY7 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
IFT140Q96RY7 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC7.42□□□□□ -1.22
IFT140Q96RY7 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC7.42□□□□□ -1.22
IFT140Q96RY7 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
IFT140Q96RY7 AL355834.1-201ENST00000556602 3965 ntBASIC7.42□□□□□ -1.22
IFT140Q96RY7 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
IFT140Q96RY7 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
IFT140Q96RY7 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
IFT140Q96RY7 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC7.42□□□□□ -1.22
IFT140Q96RY7 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC7.42□□□□□ -1.22
IFT140Q96RY7 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC7.42□□□□□ -1.22
IFT140Q96RY7 MFSD13B-201ENST00000420133 1290 ntBASIC7.42□□□□□ -1.22
IFT140Q96RY7 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
IFT140Q96RY7 RN7SKP157-201ENST00000516174 282 ntBASIC7.42□□□□□ -1.22
IFT140Q96RY7 AC112230.1-201ENST00000604342 547 ntBASIC7.42□□□□□ -1.22
IFT140Q96RY7 AL160281.1-201ENST00000605307 311 ntBASIC7.42□□□□□ -1.22
IFT140Q96RY7 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC7.42□□□□□ -1.22
IFT140Q96RY7 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
IFT140Q96RY7 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC7.41□□□□□ -1.22
IFT140Q96RY7 AC092162.3-201ENST00000624511 1624 ntBASIC7.41□□□□□ -1.22
IFT140Q96RY7 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
IFT140Q96RY7 ANAPC1P1-201ENST00000426186 2145 ntBASIC7.41□□□□□ -1.22
IFT140Q96RY7 AL133243.3-201ENST00000617415 3004 ntBASIC7.41□□□□□ -1.22
IFT140Q96RY7 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC7.41□□□□□ -1.22
IFT140Q96RY7 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
IFT140Q96RY7 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
IFT140Q96RY7 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC7.41□□□□□ -1.22
IFT140Q96RY7 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
IFT140Q96RY7 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
IFT140Q96RY7 NPM1P18-201ENST00000434232 732 ntBASIC7.41□□□□□ -1.22
IFT140Q96RY7 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC7.41□□□□□ -1.22
IFT140Q96RY7 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC7.41□□□□□ -1.22
IFT140Q96RY7 DPPA3P2-201ENST00000553589 478 ntBASIC7.41□□□□□ -1.22
IFT140Q96RY7 AC026367.3-201ENST00000619032 590 ntBASIC7.41□□□□□ -1.22
IFT140Q96RY7 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
IFT140Q96RY7 AL034370.1-201ENST00000397254 1590 ntBASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms