Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 PTGES3P5-201ENST00000455109 434 ntBASIC5.4□□□□□ -1.54
VPS50Q96JG6 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.4□□□□□ -1.54
VPS50Q96JG6 RPS23P2-201ENST00000463671 415 ntBASIC5.4□□□□□ -1.54
VPS50Q96JG6 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
VPS50Q96JG6 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.4□□□□□ -1.54
VPS50Q96JG6 AC138866.2-201ENST00000508650 584 ntBASIC5.4□□□□□ -1.54
VPS50Q96JG6 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
VPS50Q96JG6 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.4□□□□□ -1.54
VPS50Q96JG6 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.4□□□□□ -1.54
VPS50Q96JG6 AC109635.6-201ENST00000525487 1113 ntBASIC5.4□□□□□ -1.54
VPS50Q96JG6 MTATP6P15-201ENST00000527233 835 ntBASIC5.4□□□□□ -1.54
VPS50Q96JG6 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC5.4□□□□□ -1.54
VPS50Q96JG6 AL049870.4-201ENST00000555741 486 ntBASIC5.4□□□□□ -1.54
VPS50Q96JG6 AC009097.3-201ENST00000563557 1018 ntBASIC5.4□□□□□ -1.54
VPS50Q96JG6 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.4□□□□□ -1.54
VPS50Q96JG6 SNORD95-201ENST00000579879 68 ntBASIC5.4□□□□□ -1.54
VPS50Q96JG6 AC018618.2-201ENST00000604770 446 ntBASIC5.4□□□□□ -1.54
VPS50Q96JG6 AC079610.2-201ENST00000604818 690 ntBASIC5.4□□□□□ -1.54
VPS50Q96JG6 AC104695.2-201ENST00000605056 775 ntBASIC5.4□□□□□ -1.54
VPS50Q96JG6 AP001642.1-201ENST00000624727 2117 ntBASIC5.4□□□□□ -1.54
VPS50Q96JG6 CASC19-281ENST00000642118 1554 ntBASIC5.4□□□□□ -1.55
VPS50Q96JG6 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.4□□□□□ -1.55
VPS50Q96JG6 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
VPS50Q96JG6 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
VPS50Q96JG6 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.4□□□□□ -1.55
VPS50Q96JG6 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
VPS50Q96JG6 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.4□□□□□ -1.55
VPS50Q96JG6 MTND4P8-201ENST00000514997 1362 ntBASIC5.4□□□□□ -1.55
VPS50Q96JG6 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
VPS50Q96JG6 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
VPS50Q96JG6 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VPS50Q96JG6 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
VPS50Q96JG6 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
VPS50Q96JG6 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.39□□□□□ -1.55
VPS50Q96JG6 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VPS50Q96JG6 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VPS50Q96JG6 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.39□□□□□ -1.55
VPS50Q96JG6 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VPS50Q96JG6 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VPS50Q96JG6 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.39□□□□□ -1.55
VPS50Q96JG6 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
VPS50Q96JG6 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
VPS50Q96JG6 RNU4-44P-201ENST00000363050 141 ntBASIC5.39□□□□□ -1.55
VPS50Q96JG6 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.39□□□□□ -1.55
VPS50Q96JG6 SNORD65C-201ENST00000390962 71 ntBASIC5.39□□□□□ -1.55
VPS50Q96JG6 U3.25-201ENST00000391209 220 ntBASIC5.39□□□□□ -1.55
VPS50Q96JG6 RPL7P27-201ENST00000403775 720 ntBASIC5.39□□□□□ -1.55
VPS50Q96JG6 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.39□□□□□ -1.55
VPS50Q96JG6 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS50Q96JG6 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.39□□□□□ -1.55
VPS50Q96JG6 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.39□□□□□ -1.55
VPS50Q96JG6 RPS4XP16-201ENST00000427198 791 ntBASIC5.39□□□□□ -1.55
VPS50Q96JG6 AL589765.3-201ENST00000446084 462 ntBASIC5.39□□□□□ -1.55
VPS50Q96JG6 AC004022.1-201ENST00000447766 1066 ntBASIC5.39□□□□□ -1.55
VPS50Q96JG6 OR7E116P-201ENST00000448529 957 ntBASIC5.39□□□□□ -1.55
VPS50Q96JG6 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS50Q96JG6 NPM1P39-201ENST00000449818 867 ntBASIC5.39□□□□□ -1.55
VPS50Q96JG6 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS50Q96JG6 AC093166.4-201ENST00000457867 318 ntBASIC5.39□□□□□ -1.55
VPS50Q96JG6 RN7SL591P-201ENST00000496150 292 ntBASIC5.39□□□□□ -1.55
VPS50Q96JG6 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.39□□□□□ -1.55
VPS50Q96JG6 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS50Q96JG6 AC105384.2-201ENST00000508433 640 ntBASIC5.39□□□□□ -1.55
VPS50Q96JG6 AC021106.1-201ENST00000509020 1058 ntBASIC5.39□□□□□ -1.55
VPS50Q96JG6 ATP5LP3-201ENST00000514223 304 ntBASIC5.39□□□□□ -1.55
VPS50Q96JG6 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS50Q96JG6 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.39□□□□□ -1.55
VPS50Q96JG6 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VPS50Q96JG6 NDUFS5P6-201ENST00000529136 295 ntBASIC5.39□□□□□ -1.55
VPS50Q96JG6 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.39□□□□□ -1.55
VPS50Q96JG6 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.39□□□□□ -1.55
VPS50Q96JG6 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS50Q96JG6 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.39□□□□□ -1.55
VPS50Q96JG6 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.39□□□□□ -1.55
VPS50Q96JG6 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS50Q96JG6 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.39□□□□□ -1.55
VPS50Q96JG6 AC011374.2-201ENST00000607135 526 ntBASIC5.39□□□□□ -1.55
VPS50Q96JG6 AC021755.4-201ENST00000616620 456 ntBASIC5.39□□□□□ -1.55
VPS50Q96JG6 MIR6886-201ENST00000619864 61 ntBASIC5.39□□□□□ -1.55
VPS50Q96JG6 AL035661.1-201ENST00000620459 1144 ntBASIC5.39□□□□□ -1.55
VPS50Q96JG6 CU639417.4-201ENST00000623928 207 ntBASIC5.39□□□□□ -1.55
VPS50Q96JG6 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.39□□□□□ -1.55
VPS50Q96JG6 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.39□□□□□ -1.55
VPS50Q96JG6 AC021242.1-201ENST00000507315 2035 ntBASIC5.39□□□□□ -1.55
VPS50Q96JG6 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.39□□□□□ -1.55
VPS50Q96JG6 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VPS50Q96JG6 ZNF652P1-201ENST00000442420 1309 ntBASIC5.39□□□□□ -1.55
VPS50Q96JG6 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VPS50Q96JG6 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.39□□□□□ -1.55
VPS50Q96JG6 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VPS50Q96JG6 MTCO1P18-201ENST00000455518 1419 ntBASIC5.39□□□□□ -1.55
VPS50Q96JG6 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.39□□□□□ -1.55
VPS50Q96JG6 Z95331.1-201ENST00000623075 23112 ntBASIC5.39□□□□□ -1.55
VPS50Q96JG6 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.39□□□□□ -1.55
VPS50Q96JG6 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
VPS50Q96JG6 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VPS50Q96JG6 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
VPS50Q96JG6 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.38□□□□□ -1.55
VPS50Q96JG6 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VPS50Q96JG6 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms