Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 KARSP3-201ENST00000571212 1504 ntBASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 AL672167.1-204ENST00000641875 3017 ntBASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 RNU6-398P-201ENST00000384143 109 ntBASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 RPS16P5-201ENST00000406501 404 ntBASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 RN7SKP106-201ENST00000410832 272 ntBASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 SEPT7P8-201ENST00000413308 775 ntBASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 NMNAT1P2-201ENST00000435192 860 ntBASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 RAB9AP5-201ENST00000437794 597 ntBASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 RAB9AP2-201ENST00000443911 597 ntBASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 CEACAMP6-201ENST00000452007 574 ntBASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 RPS29P33-201ENST00000456717 146 ntBASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 RPL21P6-201ENST00000479171 504 ntBASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 AC025423.2-201ENST00000537570 439 ntBASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 AL121839.1-201ENST00000556233 1185 ntBASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 AL133406.3-201ENST00000606817 541 ntBASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 AC020763.5-201ENST00000623298 430 ntBASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 AP003499.2-201ENST00000624100 483 ntBASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 DHX40P1-201ENST00000588725 1412 ntBASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 STX3-208ENST00000641815 3236 ntBASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 AL022393.1-201ENST00000625142 1677 ntBASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 AC233968.1-201ENST00000611212 1300 ntBASIC4.7□□□□□ -1.66
ECHDC3Q96DC8 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.69□□□□□ -1.66
ECHDC3Q96DC8 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
ECHDC3Q96DC8 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ECHDC3Q96DC8 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
ECHDC3Q96DC8 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
ECHDC3Q96DC8 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ECHDC3Q96DC8 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
ECHDC3Q96DC8 SNORD113.2-201ENST00000364166 89 ntBASIC4.69□□□□□ -1.66
ECHDC3Q96DC8 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.69□□□□□ -1.66
ECHDC3Q96DC8 AC119751.6-201ENST00000416712 186 ntBASIC4.69□□□□□ -1.66
ECHDC3Q96DC8 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.69□□□□□ -1.66
ECHDC3Q96DC8 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.69□□□□□ -1.66
ECHDC3Q96DC8 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.69□□□□□ -1.66
ECHDC3Q96DC8 MTND4LP12-201ENST00000448237 295 ntBASIC4.69□□□□□ -1.66
ECHDC3Q96DC8 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.69□□□□□ -1.66
ECHDC3Q96DC8 AC008897.1-201ENST00000494006 347 ntBASIC4.69□□□□□ -1.66
ECHDC3Q96DC8 MTND4LP2-201ENST00000502312 285 ntBASIC4.69□□□□□ -1.66
ECHDC3Q96DC8 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.69□□□□□ -1.66
ECHDC3Q96DC8 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.69□□□□□ -1.66
ECHDC3Q96DC8 RNA5SP303-201ENST00000516192 130 ntBASIC4.69□□□□□ -1.66
ECHDC3Q96DC8 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.69□□□□□ -1.66
ECHDC3Q96DC8 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.69□□□□□ -1.66
ECHDC3Q96DC8 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.69□□□□□ -1.66
ECHDC3Q96DC8 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.69□□□□□ -1.66
ECHDC3Q96DC8 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.69□□□□□ -1.66
ECHDC3Q96DC8 MIR3936-201ENST00000584304 110 ntBASIC4.69□□□□□ -1.66
ECHDC3Q96DC8 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.69□□□□□ -1.66
ECHDC3Q96DC8 AC096553.1-201ENST00000605169 829 ntBASIC4.69□□□□□ -1.66
ECHDC3Q96DC8 MIR6820-201ENST00000611508 62 ntBASIC4.69□□□□□ -1.66
ECHDC3Q96DC8 uc_338.18-201ENST00000615451 175 ntBASIC4.69□□□□□ -1.66
ECHDC3Q96DC8 AC004232.3-201ENST00000622977 525 ntBASIC4.69□□□□□ -1.66
ECHDC3Q96DC8 AC021106.3-201ENST00000623925 531 ntBASIC4.69□□□□□ -1.66
ECHDC3Q96DC8 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.69□□□□□ -1.66
ECHDC3Q96DC8 AC135352.1-201ENST00000506173 1418 ntBASIC4.69□□□□□ -1.66
ECHDC3Q96DC8 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ECHDC3Q96DC8 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
ECHDC3Q96DC8 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.69□□□□□ -1.66
ECHDC3Q96DC8 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
ECHDC3Q96DC8 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.69□□□□□ -1.66
ECHDC3Q96DC8 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
ECHDC3Q96DC8 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 ZNF137P-201ENST00000456718 1920 ntBASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms