Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VPS33AQ96AX1 AC023490.2-201ENST00000359859 470 ntBASIC4.92□□□□□ -1.62
VPS33AQ96AX1 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
VPS33AQ96AX1 RNA5SP90-201ENST00000364801 99 ntBASIC4.92□□□□□ -1.62
VPS33AQ96AX1 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VPS33AQ96AX1 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
VPS33AQ96AX1 OR8V1P-201ENST00000395193 873 ntBASIC4.92□□□□□ -1.62
VPS33AQ96AX1 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS33AQ96AX1 AC013429.2-201ENST00000418798 781 ntBASIC4.92□□□□□ -1.62
VPS33AQ96AX1 AL358176.3-201ENST00000420757 454 ntBASIC4.92□□□□□ -1.62
VPS33AQ96AX1 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC4.92□□□□□ -1.62
VPS33AQ96AX1 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS33AQ96AX1 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
VPS33AQ96AX1 RPS20P1-201ENST00000434853 354 ntBASIC4.92□□□□□ -1.62
VPS33AQ96AX1 AC012075.1-201ENST00000436549 580 ntBASIC4.92□□□□□ -1.62
VPS33AQ96AX1 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS33AQ96AX1 AC064862.4-201ENST00000442180 334 ntBASIC4.92□□□□□ -1.62
VPS33AQ96AX1 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VPS33AQ96AX1 AL591473.1-201ENST00000464297 313 ntBASIC4.92□□□□□ -1.62
VPS33AQ96AX1 NDUFA5P5-201ENST00000468361 342 ntBASIC4.92□□□□□ -1.62
VPS33AQ96AX1 AC007998.1-201ENST00000474156 672 ntBASIC4.92□□□□□ -1.62
VPS33AQ96AX1 AC097173.1-201ENST00000505862 819 ntBASIC4.92□□□□□ -1.62
VPS33AQ96AX1 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC4.92□□□□□ -1.62
VPS33AQ96AX1 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS33AQ96AX1 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.92□□□□□ -1.62
VPS33AQ96AX1 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS33AQ96AX1 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.92□□□□□ -1.62
VPS33AQ96AX1 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VPS33AQ96AX1 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
VPS33AQ96AX1 AL121594.4-201ENST00000556211 1196 ntBASIC4.92□□□□□ -1.62
VPS33AQ96AX1 RPL10P14-201ENST00000565265 298 ntBASIC4.92□□□□□ -1.62
VPS33AQ96AX1 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS33AQ96AX1 AC015720.2-201ENST00000567709 334 ntBASIC4.92□□□□□ -1.62
VPS33AQ96AX1 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.92□□□□□ -1.62
VPS33AQ96AX1 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS33AQ96AX1 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS33AQ96AX1 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS33AQ96AX1 AL355816.1-201ENST00000607951 118 ntBASIC4.92□□□□□ -1.62
VPS33AQ96AX1 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS33AQ96AX1 AC015914.2-201ENST00000618167 288 ntBASIC4.92□□□□□ -1.62
VPS33AQ96AX1 U6.48-201ENST00000618523 106 ntBASIC4.92□□□□□ -1.62
VPS33AQ96AX1 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS33AQ96AX1 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VPS33AQ96AX1 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
VPS33AQ96AX1 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VPS33AQ96AX1 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.92□□□□□ -1.62
VPS33AQ96AX1 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.92□□□□□ -1.62
VPS33AQ96AX1 AC092747.4-201ENST00000620519 1861 ntBASIC4.92□□□□□ -1.62
VPS33AQ96AX1 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS33AQ96AX1 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VPS33AQ96AX1 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
VPS33AQ96AX1 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS33AQ96AX1 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.91□□□□□ -1.62
VPS33AQ96AX1 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
VPS33AQ96AX1 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
VPS33AQ96AX1 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
VPS33AQ96AX1 AC011155.1-201ENST00000316512 456 ntBASIC4.91□□□□□ -1.62
VPS33AQ96AX1 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS33AQ96AX1 RNU6-98P-201ENST00000384173 107 ntBASIC4.91□□□□□ -1.62
VPS33AQ96AX1 RNA5SP284-201ENST00000384547 118 ntBASIC4.91□□□□□ -1.62
VPS33AQ96AX1 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
VPS33AQ96AX1 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.91□□□□□ -1.62
VPS33AQ96AX1 EIF4A1P3-201ENST00000411521 244 ntBASIC4.91□□□□□ -1.62
VPS33AQ96AX1 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS33AQ96AX1 AL158825.1-201ENST00000414735 521 ntBASIC4.91□□□□□ -1.62
VPS33AQ96AX1 IPPKP1-201ENST00000422501 768 ntBASIC4.91□□□□□ -1.62
VPS33AQ96AX1 VN1R42P-201ENST00000424651 344 ntBASIC4.91□□□□□ -1.62
VPS33AQ96AX1 AL139148.1-201ENST00000427122 680 ntBASIC4.91□□□□□ -1.62
VPS33AQ96AX1 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.91□□□□□ -1.62
VPS33AQ96AX1 AC005189.1-201ENST00000431286 310 ntBASIC4.91□□□□□ -1.62
VPS33AQ96AX1 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.91□□□□□ -1.62
VPS33AQ96AX1 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.91□□□□□ -1.62
VPS33AQ96AX1 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.91□□□□□ -1.62
VPS33AQ96AX1 AC073109.1-201ENST00000445066 978 ntBASIC4.91□□□□□ -1.62
VPS33AQ96AX1 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS33AQ96AX1 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS33AQ96AX1 AC239809.1-201ENST00000450470 217 ntBASIC4.91□□□□□ -1.62
VPS33AQ96AX1 AL935212.3-201ENST00000450729 284 ntBASIC4.91□□□□□ -1.62
VPS33AQ96AX1 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VPS33AQ96AX1 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.91□□□□□ -1.62
VPS33AQ96AX1 RPS6P2-201ENST00000454208 705 ntBASIC4.91□□□□□ -1.62
VPS33AQ96AX1 RPL35AP19-201ENST00000469425 329 ntBASIC4.91□□□□□ -1.62
VPS33AQ96AX1 AC133963.2-201ENST00000513686 578 ntBASIC4.91□□□□□ -1.62
VPS33AQ96AX1 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS33AQ96AX1 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.91□□□□□ -1.62
VPS33AQ96AX1 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS33AQ96AX1 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VPS33AQ96AX1 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.91□□□□□ -1.62
VPS33AQ96AX1 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.91□□□□□ -1.62
VPS33AQ96AX1 AC110743.1-201ENST00000584870 478 ntBASIC4.91□□□□□ -1.62
VPS33AQ96AX1 OR2BH1P-201ENST00000608850 864 ntBASIC4.91□□□□□ -1.62
VPS33AQ96AX1 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.91□□□□□ -1.62
VPS33AQ96AX1 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS33AQ96AX1 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS33AQ96AX1 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS33AQ96AX1 OR2L1P-202ENST00000641567 1023 ntBASIC4.91□□□□□ -1.62
VPS33AQ96AX1 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS33AQ96AX1 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS33AQ96AX1 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS33AQ96AX1 AC114546.3-201ENST00000623582 1734 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms