Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
NUP43Q8NFH3 AL355480.1-201ENST00000629041 99 ntBASIC5.88□□□□□ -1.47
NUP43Q8NFH3 AC116667.2-201ENST00000641075 823 ntBASIC5.88□□□□□ -1.47
NUP43Q8NFH3 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
NUP43Q8NFH3 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.88□□□□□ -1.47
NUP43Q8NFH3 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
NUP43Q8NFH3 GTF2H2B-203ENST00000508065 1432 ntBASIC5.88□□□□□ -1.47
NUP43Q8NFH3 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
NUP43Q8NFH3 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NUP43Q8NFH3 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.88□□□□□ -1.47
NUP43Q8NFH3 AC100871.1-201ENST00000507871 1456 ntBASIC5.88□□□□□ -1.47
NUP43Q8NFH3 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
NUP43Q8NFH3 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
NUP43Q8NFH3 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NUP43Q8NFH3 AC092692.1-201ENST00000623625 2595 ntBASIC5.88□□□□□ -1.47
NUP43Q8NFH3 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NUP43Q8NFH3 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
NUP43Q8NFH3 AC011447.7-201ENST00000624228 1590 ntBASIC5.88□□□□□ -1.47
NUP43Q8NFH3 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NUP43Q8NFH3 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
NUP43Q8NFH3 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
NUP43Q8NFH3 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NUP43Q8NFH3 AP001541.1-201ENST00000623322 1904 ntBASIC5.87□□□□□ -1.47
NUP43Q8NFH3 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 RNU6-185P-201ENST00000384421 107 ntBASIC5.87□□□□□ -1.47
NUP43Q8NFH3 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 AL161909.1-201ENST00000397390 712 ntBASIC5.87□□□□□ -1.47
NUP43Q8NFH3 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 HMGA1P8-201ENST00000414130 321 ntBASIC5.87□□□□□ -1.47
NUP43Q8NFH3 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 MTCYBP24-201ENST00000420387 1106 ntBASIC5.87□□□□□ -1.47
NUP43Q8NFH3 GAPDHP49-201ENST00000421421 961 ntBASIC5.87□□□□□ -1.47
NUP43Q8NFH3 RWDD4P2-201ENST00000426392 563 ntBASIC5.87□□□□□ -1.47
NUP43Q8NFH3 AL009174.1-201ENST00000426577 416 ntBASIC5.87□□□□□ -1.47
NUP43Q8NFH3 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 RPL7P29-201ENST00000437151 728 ntBASIC5.87□□□□□ -1.47
NUP43Q8NFH3 AC092427.1-201ENST00000439177 601 ntBASIC5.87□□□□□ -1.47
NUP43Q8NFH3 AC092601.1-201ENST00000444526 383 ntBASIC5.87□□□□□ -1.47
NUP43Q8NFH3 MORF4-201ENST00000447135 971 ntBASIC5.87□□□□□ -1.47
NUP43Q8NFH3 Z99127.3-201ENST00000448158 395 ntBASIC5.87□□□□□ -1.47
NUP43Q8NFH3 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 RPS27AP3-201ENST00000453803 454 ntBASIC5.87□□□□□ -1.47
NUP43Q8NFH3 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 AL672167.3-201ENST00000465951 960 ntBASIC5.87□□□□□ -1.47
NUP43Q8NFH3 RPS3AP17-201ENST00000472594 777 ntBASIC5.87□□□□□ -1.47
NUP43Q8NFH3 AC090013.1-201ENST00000485147 480 ntBASIC5.87□□□□□ -1.47
NUP43Q8NFH3 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 SETP14-201ENST00000497538 873 ntBASIC5.87□□□□□ -1.47
NUP43Q8NFH3 AC091133.4-201ENST00000511142 308 ntBASIC5.87□□□□□ -1.47
NUP43Q8NFH3 ARL2BPP6-201ENST00000512757 439 ntBASIC5.87□□□□□ -1.47
NUP43Q8NFH3 RN7SKP70-201ENST00000516655 271 ntBASIC5.87□□□□□ -1.47
NUP43Q8NFH3 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 AC107958.1-201ENST00000556576 290 ntBASIC5.87□□□□□ -1.47
NUP43Q8NFH3 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 AC138207.8-204ENST00000579588 527 ntBASIC5.87□□□□□ -1.47
NUP43Q8NFH3 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 MIR6780B-201ENST00000610307 79 ntBASIC5.87□□□□□ -1.47
NUP43Q8NFH3 AC091834.1-201ENST00000614543 472 ntBASIC5.87□□□□□ -1.47
NUP43Q8NFH3 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 AC011504.1-201ENST00000623331 4103 ntBASIC5.87□□□□□ -1.47
NUP43Q8NFH3 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NUP43Q8NFH3 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms