Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC65Q8IXS2 RPS27P18-201ENST00000431701 247 ntBASIC5.22□□□□□ -1.57
CCDC65Q8IXS2 PA2G4P6-201ENST00000438325 1197 ntBASIC5.22□□□□□ -1.57
CCDC65Q8IXS2 AC073648.4-201ENST00000442655 781 ntBASIC5.22□□□□□ -1.57
CCDC65Q8IXS2 AC073587.1-201ENST00000447093 876 ntBASIC5.22□□□□□ -1.57
CCDC65Q8IXS2 AC091685.2-201ENST00000454924 864 ntBASIC5.22□□□□□ -1.57
CCDC65Q8IXS2 RPS3AP41-201ENST00000462701 778 ntBASIC5.22□□□□□ -1.57
CCDC65Q8IXS2 AC108751.2-201ENST00000469993 231 ntBASIC5.22□□□□□ -1.57
CCDC65Q8IXS2 AC098583.1-201ENST00000480875 255 ntBASIC5.22□□□□□ -1.57
CCDC65Q8IXS2 RN7SKP276-201ENST00000516242 268 ntBASIC5.22□□□□□ -1.57
CCDC65Q8IXS2 NPM1P6-201ENST00000521088 871 ntBASIC5.22□□□□□ -1.57
CCDC65Q8IXS2 PDCD5P1-201ENST00000543528 309 ntBASIC5.22□□□□□ -1.57
CCDC65Q8IXS2 AC079075.1-201ENST00000559543 878 ntBASIC5.22□□□□□ -1.57
CCDC65Q8IXS2 CD24P2-201ENST00000565486 219 ntBASIC5.22□□□□□ -1.57
CCDC65Q8IXS2 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CCDC65Q8IXS2 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC65Q8IXS2 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC65Q8IXS2 AC130352.1-201ENST00000602979 661 ntBASIC5.22□□□□□ -1.57
CCDC65Q8IXS2 AC097505.1-201ENST00000610199 565 ntBASIC5.22□□□□□ -1.57
CCDC65Q8IXS2 AC022106.2-201ENST00000620114 757 ntBASIC5.22□□□□□ -1.57
CCDC65Q8IXS2 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC65Q8IXS2 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC65Q8IXS2 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC65Q8IXS2 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC65Q8IXS2 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
CCDC65Q8IXS2 AC087190.4-201ENST00000574616 8334 ntBASIC5.22□□□□□ -1.57
CCDC65Q8IXS2 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
CCDC65Q8IXS2 AL031119.1-201ENST00000404707 1879 ntBASIC5.22□□□□□ -1.57
CCDC65Q8IXS2 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
CCDC65Q8IXS2 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CCDC65Q8IXS2 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 RN7SKP267-201ENST00000410381 285 ntBASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 RN7SKP100-201ENST00000411258 284 ntBASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 EIF4A1P3-201ENST00000411521 244 ntBASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 BX510359.2-201ENST00000417920 305 ntBASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 AC013268.2-201ENST00000420753 337 ntBASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 CYCSP11-201ENST00000436426 315 ntBASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 RPS3AP53-201ENST00000454716 778 ntBASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 ARL4AP1-201ENST00000503220 705 ntBASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 NDUFA5P12-201ENST00000503796 343 ntBASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 SOX5P1-201ENST00000524155 1127 ntBASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 BRD9P1-201ENST00000529855 560 ntBASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 RN7SL652P-201ENST00000577769 300 ntBASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 AP005119.2-201ENST00000579735 1105 ntBASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 COX6CP4-201ENST00000605798 228 ntBASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 AL354950.1-201ENST00000614150 568 ntBASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 AL445528.2-201ENST00000620582 470 ntBASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 AL359757.1-201ENST00000623176 255 ntBASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC65Q8IXS2 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 AC132825.1-201ENST00000463573 2247 ntBASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 RN7SKP115-201ENST00000363177 317 ntBASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 RNU6-167P-201ENST00000384292 106 ntBASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 OR51B3P-201ENST00000412287 913 ntBASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 AL356968.2-201ENST00000412769 1257 ntBASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 AC104837.2-201ENST00000427236 424 ntBASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 AC016831.4-201ENST00000438302 307 ntBASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 RPL12P3-201ENST00000440080 396 ntBASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 AL445433.1-201ENST00000457507 257 ntBASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 AC093270.2-201ENST00000486157 792 ntBASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 RPL32P9-201ENST00000487963 407 ntBASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC65Q8IXS2 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms