Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 LINC01355-201ENST00000566551 5444 ntBASIC4.48□□□□□ -1.69
HMGCS1Q01581 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.48□□□□□ -1.69
HMGCS1Q01581 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMGCS1Q01581 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
HMGCS1Q01581 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HMGCS1Q01581 AC092435.4-201ENST00000623012 4159 ntBASIC4.47□□□□□ -1.69
HMGCS1Q01581 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.47□□□□□ -1.69
HMGCS1Q01581 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.47□□□□□ -1.69
HMGCS1Q01581 HSPD1P14-201ENST00000432666 1618 ntBASIC4.47□□□□□ -1.69
HMGCS1Q01581 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.47□□□□□ -1.69
HMGCS1Q01581 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HMGCS1Q01581 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
HMGCS1Q01581 BMS1P3-201ENST00000372011 932 ntBASIC4.47□□□□□ -1.69
HMGCS1Q01581 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.47□□□□□ -1.69
HMGCS1Q01581 AC097523.2-201ENST00000435551 652 ntBASIC4.47□□□□□ -1.69
HMGCS1Q01581 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.47□□□□□ -1.69
HMGCS1Q01581 AC073648.4-201ENST00000442655 781 ntBASIC4.47□□□□□ -1.69
HMGCS1Q01581 MTCO3P17-201ENST00000443775 513 ntBASIC4.47□□□□□ -1.69
HMGCS1Q01581 OR1H1P-201ENST00000448731 937 ntBASIC4.47□□□□□ -1.69
HMGCS1Q01581 RPS3AP53-201ENST00000454716 778 ntBASIC4.47□□□□□ -1.69
HMGCS1Q01581 AC025164.1-201ENST00000496249 478 ntBASIC4.47□□□□□ -1.69
HMGCS1Q01581 AC231760.1-201ENST00000498002 260 ntBASIC4.47□□□□□ -1.69
HMGCS1Q01581 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.47□□□□□ -1.69
HMGCS1Q01581 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.47□□□□□ -1.69
HMGCS1Q01581 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HMGCS1Q01581 AP002981.1-201ENST00000517692 975 ntBASIC4.47□□□□□ -1.69
HMGCS1Q01581 BRD9P1-201ENST00000529855 560 ntBASIC4.47□□□□□ -1.69
HMGCS1Q01581 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.47□□□□□ -1.69
HMGCS1Q01581 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.47□□□□□ -1.69
HMGCS1Q01581 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.47□□□□□ -1.69
HMGCS1Q01581 MIR4675-201ENST00000577898 77 ntBASIC4.47□□□□□ -1.69
HMGCS1Q01581 MIR6730-201ENST00000622213 67 ntBASIC4.47□□□□□ -1.69
HMGCS1Q01581 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.47□□□□□ -1.69
HMGCS1Q01581 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HMGCS1Q01581 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
HMGCS1Q01581 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.47□□□□□ -1.69
HMGCS1Q01581 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HMGCS1Q01581 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
HMGCS1Q01581 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.47□□□□□ -1.69
HMGCS1Q01581 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HMGCS1Q01581 MAPK10-320ENST00000641462 6696 ntBASIC4.47□□□□□ -1.69
HMGCS1Q01581 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HMGCS1Q01581 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
HMGCS1Q01581 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
HMGCS1Q01581 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HMGCS1Q01581 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HMGCS1Q01581 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
HMGCS1Q01581 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.46□□□□□ -1.7
HMGCS1Q01581 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
HMGCS1Q01581 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HMGCS1Q01581 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.46□□□□□ -1.7
HMGCS1Q01581 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.46□□□□□ -1.7
HMGCS1Q01581 MIR195-201ENST00000385194 87 ntBASIC4.46□□□□□ -1.7
HMGCS1Q01581 MIR921-201ENST00000401133 56 ntBASIC4.46□□□□□ -1.7
HMGCS1Q01581 AL133270.1-201ENST00000402635 279 ntBASIC4.46□□□□□ -1.7
HMGCS1Q01581 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.46□□□□□ -1.7
HMGCS1Q01581 AC104837.2-201ENST00000427236 424 ntBASIC4.46□□□□□ -1.7
HMGCS1Q01581 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.46□□□□□ -1.7
HMGCS1Q01581 AC007559.1-201ENST00000428736 355 ntBASIC4.46□□□□□ -1.7
HMGCS1Q01581 PPIAP13-201ENST00000434706 478 ntBASIC4.46□□□□□ -1.7
HMGCS1Q01581 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.46□□□□□ -1.7
HMGCS1Q01581 CYCSP11-201ENST00000436426 315 ntBASIC4.46□□□□□ -1.7
HMGCS1Q01581 AC108463.1-201ENST00000450258 347 ntBASIC4.46□□□□□ -1.7
HMGCS1Q01581 AC063943.1-201ENST00000465434 453 ntBASIC4.46□□□□□ -1.7
HMGCS1Q01581 AC107015.1-201ENST00000466902 747 ntBASIC4.46□□□□□ -1.7
HMGCS1Q01581 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HMGCS1Q01581 AC125612.1-201ENST00000547580 377 ntBASIC4.46□□□□□ -1.7
HMGCS1Q01581 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.46□□□□□ -1.7
HMGCS1Q01581 RN7SL652P-201ENST00000577769 300 ntBASIC4.46□□□□□ -1.7
HMGCS1Q01581 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.46□□□□□ -1.7
HMGCS1Q01581 AC024940.4-201ENST00000605507 246 ntBASIC4.46□□□□□ -1.7
HMGCS1Q01581 AL049539.1-201ENST00000611964 459 ntBASIC4.46□□□□□ -1.7
HMGCS1Q01581 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HMGCS1Q01581 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HMGCS1Q01581 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.46□□□□□ -1.7
HMGCS1Q01581 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
HMGCS1Q01581 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
HMGCS1Q01581 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.46□□□□□ -1.7
HMGCS1Q01581 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.46□□□□□ -1.7
HMGCS1Q01581 AL391684.1-202ENST00000641293 1636 ntBASIC4.46□□□□□ -1.7
HMGCS1Q01581 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
HMGCS1Q01581 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HMGCS1Q01581 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMGCS1Q01581 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HMGCS1Q01581 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMGCS1Q01581 ZFRP1-201ENST00000457579 2970 ntBASIC4.45□□□□□ -1.7
HMGCS1Q01581 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.45□□□□□ -1.7
HMGCS1Q01581 THAP12P8-201ENST00000447914 2115 ntBASIC4.45□□□□□ -1.7
HMGCS1Q01581 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.45□□□□□ -1.7
HMGCS1Q01581 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.45□□□□□ -1.7
HMGCS1Q01581 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
HMGCS1Q01581 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HMGCS1Q01581 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.45□□□□□ -1.7
HMGCS1Q01581 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.45□□□□□ -1.7
HMGCS1Q01581 NFYAP1-201ENST00000431953 972 ntBASIC4.45□□□□□ -1.7
HMGCS1Q01581 NRBF2P3-201ENST00000432731 865 ntBASIC4.45□□□□□ -1.7
HMGCS1Q01581 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.45□□□□□ -1.7
HMGCS1Q01581 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.45□□□□□ -1.7
HMGCS1Q01581 H2AFZP5-201ENST00000446960 382 ntBASIC4.45□□□□□ -1.7
HMGCS1Q01581 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms