Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.33□□□□□ -1.56
NKX6-1P78426 RNA5SP438-201ENST00000516561 112 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 RNA5SP135-201ENST00000517019 125 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.33□□□□□ -1.56
NKX6-1P78426 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.33□□□□□ -1.56
NKX6-1P78426 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.33□□□□□ -1.56
NKX6-1P78426 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC5.33□□□□□ -1.56
NKX6-1P78426 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC5.33□□□□□ -1.56
NKX6-1P78426 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.33□□□□□ -1.56
NKX6-1P78426 GTF2IP8-201ENST00000560687 584 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 AC007494.1-201ENST00000562293 760 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.33□□□□□ -1.56
NKX6-1P78426 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.33□□□□□ -1.56
NKX6-1P78426 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.33□□□□□ -1.56
NKX6-1P78426 AC090236.2-201ENST00000587933 1101 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 AC115085.1-201ENST00000588924 229 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 AC006539.2-201ENST00000601729 572 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 AC096553.1-201ENST00000605169 829 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 AL392048.1-201ENST00000613946 534 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.33□□□□□ -1.56
NKX6-1P78426 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
NKX6-1P78426 AC116563.2-201ENST00000624751 535 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 AC010608.2-201ENST00000624830 470 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 AC073488.3-201ENST00000631611 778 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.33□□□□□ -1.56
NKX6-1P78426 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.33□□□□□ -1.56
NKX6-1P78426 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.33□□□□□ -1.56
NKX6-1P78426 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
NKX6-1P78426 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NKX6-1P78426 AC092162.3-201ENST00000624511 1624 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NKX6-1P78426 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NKX6-1P78426 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
NKX6-1P78426 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NKX6-1P78426 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
NKX6-1P78426 AC093671.1-201ENST00000624981 2929 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
NKX6-1P78426 SHQ1P1-201ENST00000437111 1544 ntBASIC5.33□□□□□ -1.56
NKX6-1P78426 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.32□□□□□ -1.56
NKX6-1P78426 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
NKX6-1P78426 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.32□□□□□ -1.56
NKX6-1P78426 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NKX6-1P78426 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.32□□□□□ -1.56
NKX6-1P78426 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NKX6-1P78426 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
NKX6-1P78426 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NKX6-1P78426 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
NKX6-1P78426 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NKX6-1P78426 AC015689.2-201ENST00000528172 1738 ntBASIC5.32□□□□□ -1.56
NKX6-1P78426 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NKX6-1P78426 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.32□□□□□ -1.56
NKX6-1P78426 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NKX6-1P78426 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NKX6-1P78426 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NKX6-1P78426 IL6STP1-201ENST00000346911 1020 ntBASIC5.32□□□□□ -1.56
NKX6-1P78426 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
NKX6-1P78426 SNORD116-1-201ENST00000384335 95 ntBASIC5.32□□□□□ -1.56
NKX6-1P78426 MIR217-201ENST00000384817 110 ntBASIC5.32□□□□□ -1.56
NKX6-1P78426 U3.25-201ENST00000391209 220 ntBASIC5.32□□□□□ -1.56
NKX6-1P78426 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
NKX6-1P78426 AL161909.1-201ENST00000397390 712 ntBASIC5.32□□□□□ -1.56
NKX6-1P78426 AL096800.1-201ENST00000405326 893 ntBASIC5.32□□□□□ -1.56
NKX6-1P78426 RNU2-65P-201ENST00000410162 185 ntBASIC5.32□□□□□ -1.56
NKX6-1P78426 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.32□□□□□ -1.56
NKX6-1P78426 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.32□□□□□ -1.56
NKX6-1P78426 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC5.32□□□□□ -1.56
NKX6-1P78426 BX119904.4-201ENST00000424402 301 ntBASIC5.32□□□□□ -1.56
NKX6-1P78426 RPL7P44-201ENST00000424827 742 ntBASIC5.32□□□□□ -1.56
NKX6-1P78426 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NKX6-1P78426 Z93242.1-201ENST00000427102 353 ntBASIC5.32□□□□□ -1.56
NKX6-1P78426 MTND4P32-201ENST00000437189 1237 ntBASIC5.32□□□□□ -1.56
NKX6-1P78426 AL359265.1-201ENST00000440296 795 ntBASIC5.32□□□□□ -1.56
NKX6-1P78426 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC5.32□□□□□ -1.56
NKX6-1P78426 AL022237.1-201ENST00000446663 358 ntBASIC5.32□□□□□ -1.56
NKX6-1P78426 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC5.32□□□□□ -1.56
NKX6-1P78426 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.32□□□□□ -1.56
NKX6-1P78426 YWHAEP1-201ENST00000453697 763 ntBASIC5.32□□□□□ -1.56
NKX6-1P78426 OSTCP1-201ENST00000455507 450 ntBASIC5.32□□□□□ -1.56
NKX6-1P78426 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.32□□□□□ -1.56
NKX6-1P78426 AC012123.2-201ENST00000485809 248 ntBASIC5.32□□□□□ -1.56
NKX6-1P78426 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.32□□□□□ -1.56
NKX6-1P78426 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NKX6-1P78426 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
NKX6-1P78426 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.32□□□□□ -1.56
NKX6-1P78426 CR383658.1-201ENST00000514609 734 ntBASIC5.32□□□□□ -1.56
NKX6-1P78426 RNU6-1225P-201ENST00000516336 65 ntBASIC5.32□□□□□ -1.56
NKX6-1P78426 RNA5SP400-201ENST00000517155 111 ntBASIC5.32□□□□□ -1.56
NKX6-1P78426 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.32□□□□□ -1.56
NKX6-1P78426 AC105185.1-201ENST00000518705 535 ntBASIC5.32□□□□□ -1.56
NKX6-1P78426 HIGD1AP6-201ENST00000521833 279 ntBASIC5.32□□□□□ -1.56
NKX6-1P78426 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.32□□□□□ -1.56
NKX6-1P78426 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NKX6-1P78426 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.32□□□□□ -1.56
NKX6-1P78426 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NKX6-1P78426 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC5.32□□□□□ -1.56
NKX6-1P78426 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.32□□□□□ -1.56
NKX6-1P78426 AC004217.3-201ENST00000551552 878 ntBASIC5.32□□□□□ -1.56
NKX6-1P78426 AC004825.1-201ENST00000555068 586 ntBASIC5.32□□□□□ -1.56
NKX6-1P78426 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms