Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC073869.8-201ENST00000641806 335 ntBASIC4.34□□□□□ -1.71
CX3CL1P78423 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CX3CL1P78423 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CX3CL1P78423 AC096656.1-201ENST00000623826 1364 ntBASIC4.34□□□□□ -1.71
CX3CL1P78423 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.34□□□□□ -1.71
CX3CL1P78423 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.34□□□□□ -1.71
CX3CL1P78423 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CX3CL1P78423 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CX3CL1P78423 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.34□□□□□ -1.71
CX3CL1P78423 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
CX3CL1P78423 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CX3CL1P78423 AC009313.2-201ENST00000417893 1941 ntBASIC4.34□□□□□ -1.71
CX3CL1P78423 AC092079.1-201ENST00000558620 1985 ntBASIC4.34□□□□□ -1.71
CX3CL1P78423 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
CX3CL1P78423 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.34□□□□□ -1.72
CX3CL1P78423 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
CX3CL1P78423 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.34□□□□□ -1.72
CX3CL1P78423 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.33□□□□□ -1.72
CX3CL1P78423 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CX3CL1P78423 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.33□□□□□ -1.72
CX3CL1P78423 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CX3CL1P78423 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CX3CL1P78423 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.33□□□□□ -1.72
CX3CL1P78423 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.33□□□□□ -1.72
CX3CL1P78423 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CX3CL1P78423 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.33□□□□□ -1.72
CX3CL1P78423 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.33□□□□□ -1.72
CX3CL1P78423 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CX3CL1P78423 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CX3CL1P78423 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
CX3CL1P78423 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CX3CL1P78423 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CX3CL1P78423 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.33□□□□□ -1.72
CX3CL1P78423 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.33□□□□□ -1.72
CX3CL1P78423 RN7SKP74-201ENST00000362849 309 ntBASIC4.33□□□□□ -1.72
CX3CL1P78423 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.33□□□□□ -1.72
CX3CL1P78423 RNA5SP241-201ENST00000391326 114 ntBASIC4.33□□□□□ -1.72
CX3CL1P78423 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CX3CL1P78423 ZNF602P-201ENST00000405929 924 ntBASIC4.33□□□□□ -1.72
CX3CL1P78423 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.33□□□□□ -1.72
CX3CL1P78423 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.33□□□□□ -1.72
CX3CL1P78423 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.33□□□□□ -1.72
CX3CL1P78423 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.33□□□□□ -1.72
CX3CL1P78423 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.33□□□□□ -1.72
CX3CL1P78423 RPL12P17-201ENST00000432393 498 ntBASIC4.33□□□□□ -1.72
CX3CL1P78423 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.33□□□□□ -1.72
CX3CL1P78423 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CX3CL1P78423 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.33□□□□□ -1.72
CX3CL1P78423 AL031663.1-201ENST00000437445 219 ntBASIC4.33□□□□□ -1.72
CX3CL1P78423 AL390119.1-201ENST00000440329 312 ntBASIC4.33□□□□□ -1.72
CX3CL1P78423 RPS26P30-201ENST00000443431 335 ntBASIC4.33□□□□□ -1.72
CX3CL1P78423 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.33□□□□□ -1.72
CX3CL1P78423 EXOSC3P1-201ENST00000448649 500 ntBASIC4.33□□□□□ -1.72
CX3CL1P78423 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.33□□□□□ -1.72
CX3CL1P78423 RANP1-206ENST00000455094 651 ntBASIC4.33□□□□□ -1.72
CX3CL1P78423 SETP20-201ENST00000457046 852 ntBASIC4.33□□□□□ -1.72
CX3CL1P78423 RNU6-1218P-201ENST00000458990 108 ntBASIC4.33□□□□□ -1.72
CX3CL1P78423 RN7SL717P-201ENST00000478343 297 ntBASIC4.33□□□□□ -1.72
CX3CL1P78423 AC108729.1-201ENST00000487812 947 ntBASIC4.33□□□□□ -1.72
CX3CL1P78423 RPL7P51-201ENST00000490532 749 ntBASIC4.33□□□□□ -1.72
CX3CL1P78423 RN7SL466P-201ENST00000497546 295 ntBASIC4.33□□□□□ -1.72
CX3CL1P78423 AC090638.1-201ENST00000498296 909 ntBASIC4.33□□□□□ -1.72
CX3CL1P78423 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.33□□□□□ -1.72
CX3CL1P78423 AC011411.1-201ENST00000509592 876 ntBASIC4.33□□□□□ -1.72
CX3CL1P78423 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.33□□□□□ -1.72
CX3CL1P78423 AC104108.1-201ENST00000509930 412 ntBASIC4.33□□□□□ -1.72
CX3CL1P78423 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.33□□□□□ -1.72
CX3CL1P78423 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.33□□□□□ -1.72
CX3CL1P78423 AC109464.1-201ENST00000511091 819 ntBASIC4.33□□□□□ -1.72
CX3CL1P78423 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.33□□□□□ -1.72
CX3CL1P78423 RNA5SP303-201ENST00000516192 130 ntBASIC4.33□□□□□ -1.72
CX3CL1P78423 SCARNA16.4-201ENST00000516956 187 ntBASIC4.33□□□□□ -1.72
CX3CL1P78423 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.33□□□□□ -1.72
CX3CL1P78423 OR7E13P-201ENST00000526052 910 ntBASIC4.33□□□□□ -1.72
CX3CL1P78423 OR8I1P-201ENST00000529291 931 ntBASIC4.33□□□□□ -1.72
CX3CL1P78423 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CX3CL1P78423 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.33□□□□□ -1.72
CX3CL1P78423 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.33□□□□□ -1.72
CX3CL1P78423 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.33□□□□□ -1.72
CX3CL1P78423 MIR3936-201ENST00000584304 110 ntBASIC4.33□□□□□ -1.72
CX3CL1P78423 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.33□□□□□ -1.72
CX3CL1P78423 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.33□□□□□ -1.72
CX3CL1P78423 AC073387.2-201ENST00000604797 784 ntBASIC4.33□□□□□ -1.72
CX3CL1P78423 AC104695.2-201ENST00000605056 775 ntBASIC4.33□□□□□ -1.72
CX3CL1P78423 AC005377.1-201ENST00000605126 456 ntBASIC4.33□□□□□ -1.72
CX3CL1P78423 AC010245.2-201ENST00000606908 1167 ntBASIC4.33□□□□□ -1.72
CX3CL1P78423 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.33□□□□□ -1.72
CX3CL1P78423 AL022322.2-201ENST00000624072 20397 ntBASIC4.33□□□□□ -1.72
CX3CL1P78423 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.33□□□□□ -1.72
CX3CL1P78423 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
CX3CL1P78423 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CX3CL1P78423 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.33□□□□□ -1.72
CX3CL1P78423 AL353796.1-201ENST00000561542 3241 ntBASIC4.33□□□□□ -1.72
CX3CL1P78423 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.32□□□□□ -1.72
CX3CL1P78423 AC025574.1-201ENST00000554784 1653 ntBASIC4.32□□□□□ -1.72
CX3CL1P78423 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CX3CL1P78423 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.32□□□□□ -1.72
CX3CL1P78423 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.32□□□□□ -1.72
CX3CL1P78423 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CX3CL1P78423 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms