Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.11□□□□□ -1.59
RAE1P78406 SNRPCP3-201ENST00000474888 476 ntBASIC5.11□□□□□ -1.59
RAE1P78406 AC082651.2-201ENST00000496833 166 ntBASIC5.11□□□□□ -1.59
RAE1P78406 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.11□□□□□ -1.59
RAE1P78406 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.11□□□□□ -1.59
RAE1P78406 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.11□□□□□ -1.59
RAE1P78406 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC5.11□□□□□ -1.59
RAE1P78406 SNORA3.4-201ENST00000515969 96 ntBASIC5.11□□□□□ -1.59
RAE1P78406 SCARNA16.4-201ENST00000516956 187 ntBASIC5.11□□□□□ -1.59
RAE1P78406 AC112191.2-201ENST00000522428 333 ntBASIC5.11□□□□□ -1.59
RAE1P78406 MTCO3P15-201ENST00000526563 574 ntBASIC5.11□□□□□ -1.59
RAE1P78406 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.11□□□□□ -1.59
RAE1P78406 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.11□□□□□ -1.59
RAE1P78406 DUXAP6-201ENST00000553858 601 ntBASIC5.11□□□□□ -1.59
RAE1P78406 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC5.11□□□□□ -1.59
RAE1P78406 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RAE1P78406 AC015688.2-201ENST00000584523 262 ntBASIC5.11□□□□□ -1.59
RAE1P78406 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.11□□□□□ -1.59
RAE1P78406 FO393422.1-201ENST00000603908 708 ntBASIC5.11□□□□□ -1.59
RAE1P78406 AC009948.4-201ENST00000604692 675 ntBASIC5.11□□□□□ -1.59
RAE1P78406 AL139344.1-201ENST00000605228 195 ntBASIC5.11□□□□□ -1.59
RAE1P78406 RN7SL787P-201ENST00000613000 284 ntBASIC5.11□□□□□ -1.59
RAE1P78406 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
RAE1P78406 AC021106.3-201ENST00000623925 531 ntBASIC5.11□□□□□ -1.59
RAE1P78406 AC017037.3-201ENST00000625016 472 ntBASIC5.11□□□□□ -1.59
RAE1P78406 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RAE1P78406 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RAE1P78406 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RAE1P78406 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
RAE1P78406 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RAE1P78406 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
RAE1P78406 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
RAE1P78406 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RAE1P78406 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RAE1P78406 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RAE1P78406 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RAE1P78406 AP000432.2-201ENST00000624164 2048 ntBASIC5.11□□□□□ -1.59
RAE1P78406 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RAE1P78406 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RAE1P78406 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RAE1P78406 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RAE1P78406 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
RAE1P78406 OR9G4-201ENST00000302957 984 ntBASIC5.1□□□□□ -1.59
RAE1P78406 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RAE1P78406 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RAE1P78406 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.1□□□□□ -1.59
RAE1P78406 MIR133B-201ENST00000362210 119 ntBASIC5.1□□□□□ -1.59
RAE1P78406 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.1□□□□□ -1.59
RAE1P78406 AL445213.1-201ENST00000412589 747 ntBASIC5.1□□□□□ -1.59
RAE1P78406 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.1□□□□□ -1.59
RAE1P78406 SDHDP6-201ENST00000414693 480 ntBASIC5.1□□□□□ -1.59
RAE1P78406 AC027644.1-201ENST00000419595 298 ntBASIC5.1□□□□□ -1.59
RAE1P78406 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.1□□□□□ -1.59
RAE1P78406 RAC1P8-201ENST00000427086 527 ntBASIC5.1□□□□□ -1.59
RAE1P78406 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.1□□□□□ -1.59
RAE1P78406 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.1□□□□□ -1.59
RAE1P78406 AC092647.3-201ENST00000443044 633 ntBASIC5.1□□□□□ -1.59
RAE1P78406 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.1□□□□□ -1.59
RAE1P78406 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.1□□□□□ -1.59
RAE1P78406 NOP56P2-201ENST00000447491 769 ntBASIC5.1□□□□□ -1.59
RAE1P78406 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.1□□□□□ -1.59
RAE1P78406 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.1□□□□□ -1.59
RAE1P78406 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC5.1□□□□□ -1.59
RAE1P78406 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RAE1P78406 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.1□□□□□ -1.59
RAE1P78406 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
RAE1P78406 AC037198.2-201ENST00000478845 733 ntBASIC5.1□□□□□ -1.59
RAE1P78406 RPL7P40-201ENST00000481703 745 ntBASIC5.1□□□□□ -1.59
RAE1P78406 PPP1R11P1-201ENST00000486095 376 ntBASIC5.1□□□□□ -1.59
RAE1P78406 AC090638.1-201ENST00000498296 909 ntBASIC5.1□□□□□ -1.59
RAE1P78406 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.1□□□□□ -1.59
RAE1P78406 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.1□□□□□ -1.59
RAE1P78406 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.1□□□□□ -1.59
RAE1P78406 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.1□□□□□ -1.59
RAE1P78406 AC016559.2-201ENST00000510759 359 ntBASIC5.1□□□□□ -1.59
RAE1P78406 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.1□□□□□ -1.59
RAE1P78406 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.1□□□□□ -1.59
RAE1P78406 RN7SKP99-201ENST00000517028 307 ntBASIC5.1□□□□□ -1.59
RAE1P78406 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.1□□□□□ -1.59
RAE1P78406 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.1□□□□□ -1.59
RAE1P78406 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
RAE1P78406 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.1□□□□□ -1.59
RAE1P78406 BLZF2P-201ENST00000553776 1130 ntBASIC5.1□□□□□ -1.59
RAE1P78406 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC5.1□□□□□ -1.59
RAE1P78406 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.1□□□□□ -1.59
RAE1P78406 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.1□□□□□ -1.59
RAE1P78406 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.1□□□□□ -1.59
RAE1P78406 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.1□□□□□ -1.59
RAE1P78406 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.1□□□□□ -1.59
RAE1P78406 AC015720.2-201ENST00000567709 334 ntBASIC5.1□□□□□ -1.59
RAE1P78406 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.1□□□□□ -1.59
RAE1P78406 MTCO1P40-201ENST00000574371 625 ntBASIC5.1□□□□□ -1.59
RAE1P78406 MTCYBP13-201ENST00000578634 1093 ntBASIC5.1□□□□□ -1.59
RAE1P78406 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.1□□□□□ -1.59
RAE1P78406 MIR548Y-201ENST00000582739 110 ntBASIC5.1□□□□□ -1.59
RAE1P78406 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.1□□□□□ -1.59
RAE1P78406 VN1R83P-201ENST00000595685 445 ntBASIC5.1□□□□□ -1.59
RAE1P78406 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RAE1P78406 AC009027.1-201ENST00000604510 479 ntBASIC5.1□□□□□ -1.59
RAE1P78406 TUSC7.1-201ENST00000610969 165 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms