Protein–RNA interactions for Protein: P78364

PHC1, Polyhomeotic-like protein 1, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1P78364 HMGB1P4-201ENST00000455362 567 ntBASIC5.71□□□□□ -1.5
PHC1P78364 BX276092.8-201ENST00000455722 250 ntBASIC5.71□□□□□ -1.5
PHC1P78364 AC015724.1-201ENST00000478577 156 ntBASIC5.71□□□□□ -1.5
PHC1P78364 RN7SL568P-201ENST00000493069 298 ntBASIC5.71□□□□□ -1.5
PHC1P78364 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.71□□□□□ -1.5
PHC1P78364 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC5.71□□□□□ -1.5
PHC1P78364 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PHC1P78364 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.71□□□□□ -1.5
PHC1P78364 AC147055.4-201ENST00000504399 745 ntBASIC5.71□□□□□ -1.5
PHC1P78364 AC005178.1-201ENST00000508392 440 ntBASIC5.71□□□□□ -1.5
PHC1P78364 MTCO3P7-201ENST00000510008 774 ntBASIC5.71□□□□□ -1.5
PHC1P78364 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.71□□□□□ -1.5
PHC1P78364 HMGB3P13-201ENST00000511263 607 ntBASIC5.71□□□□□ -1.5
PHC1P78364 RN7SKP288-201ENST00000516227 268 ntBASIC5.71□□□□□ -1.5
PHC1P78364 snoU109.5-201ENST00000516231 132 ntBASIC5.71□□□□□ -1.5
PHC1P78364 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.71□□□□□ -1.5
PHC1P78364 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC5.71□□□□□ -1.5
PHC1P78364 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.71□□□□□ -1.5
PHC1P78364 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PHC1P78364 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.71□□□□□ -1.5
PHC1P78364 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.71□□□□□ -1.5
PHC1P78364 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC5.71□□□□□ -1.5
PHC1P78364 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC5.71□□□□□ -1.5
PHC1P78364 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.71□□□□□ -1.5
PHC1P78364 MT1CP-201ENST00000567054 174 ntBASIC5.71□□□□□ -1.5
PHC1P78364 MIR4675-201ENST00000577898 77 ntBASIC5.71□□□□□ -1.5
PHC1P78364 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.71□□□□□ -1.5
PHC1P78364 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.71□□□□□ -1.5
PHC1P78364 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.71□□□□□ -1.5
PHC1P78364 SMIM12P1-201ENST00000603004 274 ntBASIC5.71□□□□□ -1.5
PHC1P78364 AP001823.1-201ENST00000604056 1003 ntBASIC5.71□□□□□ -1.5
PHC1P78364 AC064872.1-201ENST00000604823 1072 ntBASIC5.71□□□□□ -1.5
PHC1P78364 RPSAP75-201ENST00000605848 301 ntBASIC5.71□□□□□ -1.5
PHC1P78364 AP004247.3-201ENST00000608682 624 ntBASIC5.71□□□□□ -1.5
PHC1P78364 AC013562.2-201ENST00000611632 603 ntBASIC5.71□□□□□ -1.5
PHC1P78364 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.71□□□□□ -1.5
PHC1P78364 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.71□□□□□ -1.5
PHC1P78364 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.71□□□□□ -1.5
PHC1P78364 SNX18P12-201ENST00000624821 759 ntBASIC5.71□□□□□ -1.5
PHC1P78364 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.71□□□□□ -1.5
PHC1P78364 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.71□□□□□ -1.5
PHC1P78364 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.71□□□□□ -1.5
PHC1P78364 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PHC1P78364 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
PHC1P78364 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PHC1P78364 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
PHC1P78364 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.71□□□□□ -1.5
PHC1P78364 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.71□□□□□ -1.5
PHC1P78364 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PHC1P78364 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.71□□□□□ -1.5
PHC1P78364 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PHC1P78364 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PHC1P78364 ANKRD20A17P-201ENST00000511745 1330 ntBASIC5.71□□□□□ -1.5
PHC1P78364 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PHC1P78364 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.71□□□□□ -1.5
PHC1P78364 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.71□□□□□ -1.5
PHC1P78364 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PHC1P78364 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PHC1P78364 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
PHC1P78364 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PHC1P78364 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PHC1P78364 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PHC1P78364 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PHC1P78364 AC020633.1-201ENST00000468439 2247 ntBASIC5.7□□□□□ -1.5
PHC1P78364 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PHC1P78364 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PHC1P78364 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
PHC1P78364 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.7□□□□□ -1.5
PHC1P78364 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PHC1P78364 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
PHC1P78364 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PHC1P78364 RNU6-1066P-201ENST00000363573 105 ntBASIC5.7□□□□□ -1.5
PHC1P78364 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PHC1P78364 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PHC1P78364 RPL23AP47-201ENST00000408017 460 ntBASIC5.7□□□□□ -1.5
PHC1P78364 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PHC1P78364 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PHC1P78364 RNA5SP198-201ENST00000410376 127 ntBASIC5.7□□□□□ -1.5
PHC1P78364 RNU6-920P-201ENST00000410926 92 ntBASIC5.7□□□□□ -1.5
PHC1P78364 MYL6P5-201ENST00000412707 459 ntBASIC5.7□□□□□ -1.5
PHC1P78364 RPS15AP38-201ENST00000413110 372 ntBASIC5.7□□□□□ -1.5
PHC1P78364 AL031779.1-201ENST00000415663 330 ntBASIC5.7□□□□□ -1.5
PHC1P78364 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.7□□□□□ -1.5
PHC1P78364 VN1R21P-201ENST00000426703 765 ntBASIC5.7□□□□□ -1.5
PHC1P78364 Z93242.1-201ENST00000427102 353 ntBASIC5.7□□□□□ -1.5
PHC1P78364 AL590103.1-201ENST00000434488 307 ntBASIC5.7□□□□□ -1.5
PHC1P78364 USP9YP28-201ENST00000435142 589 ntBASIC5.7□□□□□ -1.5
PHC1P78364 LINC00328-2P-201ENST00000436585 219 ntBASIC5.7□□□□□ -1.5
PHC1P78364 VN1R110P-201ENST00000438988 971 ntBASIC5.7□□□□□ -1.5
PHC1P78364 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC5.7□□□□□ -1.5
PHC1P78364 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC5.7□□□□□ -1.5
PHC1P78364 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC5.7□□□□□ -1.5
PHC1P78364 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.7□□□□□ -1.5
PHC1P78364 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PHC1P78364 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.7□□□□□ -1.5
PHC1P78364 HMGN1P16-201ENST00000508308 283 ntBASIC5.7□□□□□ -1.5
PHC1P78364 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.7□□□□□ -1.5
PHC1P78364 RN7SKP183-201ENST00000517169 324 ntBASIC5.7□□□□□ -1.5
PHC1P78364 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.7□□□□□ -1.5
PHC1P78364 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms