Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.14□□□□□ -1.75
ACTBP60709 AC132825.1-201ENST00000463573 2247 ntBASIC4.14□□□□□ -1.75
ACTBP60709 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
ACTBP60709 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
ACTBP60709 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ACTBP60709 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.14□□□□□ -1.75
ACTBP60709 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.14□□□□□ -1.75
ACTBP60709 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.14□□□□□ -1.75
ACTBP60709 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ACTBP60709 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
ACTBP60709 SNORA17.1-201ENST00000362945 126 ntBASIC4.14□□□□□ -1.75
ACTBP60709 U3.2-201ENST00000362981 210 ntBASIC4.14□□□□□ -1.75
ACTBP60709 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ACTBP60709 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ACTBP60709 AL136116.2-201ENST00000404020 785 ntBASIC4.14□□□□□ -1.75
ACTBP60709 RN7SKP126-201ENST00000411143 300 ntBASIC4.14□□□□□ -1.75
ACTBP60709 RNU6-603P-201ENST00000411403 107 ntBASIC4.14□□□□□ -1.75
ACTBP60709 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.14□□□□□ -1.75
ACTBP60709 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.14□□□□□ -1.75
ACTBP60709 EIF4EP1-201ENST00000422311 642 ntBASIC4.14□□□□□ -1.75
ACTBP60709 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.14□□□□□ -1.75
ACTBP60709 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.14□□□□□ -1.75
ACTBP60709 RPL12P34-201ENST00000424532 479 ntBASIC4.14□□□□□ -1.75
ACTBP60709 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.14□□□□□ -1.75
ACTBP60709 OR52B5P-201ENST00000435337 951 ntBASIC4.14□□□□□ -1.75
ACTBP60709 AC092013.1-201ENST00000438795 332 ntBASIC4.14□□□□□ -1.75
ACTBP60709 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.14□□□□□ -1.75
ACTBP60709 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.14□□□□□ -1.75
ACTBP60709 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.14□□□□□ -1.75
ACTBP60709 AC009127.1-201ENST00000467090 155 ntBASIC4.14□□□□□ -1.75
ACTBP60709 AC074386.1-201ENST00000476560 767 ntBASIC4.14□□□□□ -1.75
ACTBP60709 AC037198.2-201ENST00000478845 733 ntBASIC4.14□□□□□ -1.75
ACTBP60709 UBA52P7-201ENST00000486088 380 ntBASIC4.14□□□□□ -1.75
ACTBP60709 AC010350.1-201ENST00000504908 231 ntBASIC4.14□□□□□ -1.75
ACTBP60709 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.14□□□□□ -1.75
ACTBP60709 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.14□□□□□ -1.75
ACTBP60709 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.14□□□□□ -1.75
ACTBP60709 AC026688.1-201ENST00000520639 1168 ntBASIC4.14□□□□□ -1.75
ACTBP60709 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.14□□□□□ -1.75
ACTBP60709 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.14□□□□□ -1.75
ACTBP60709 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.14□□□□□ -1.75
ACTBP60709 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ACTBP60709 GLRXP2-201ENST00000555594 321 ntBASIC4.14□□□□□ -1.75
ACTBP60709 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC4.14□□□□□ -1.75
ACTBP60709 MIR3176-201ENST00000582210 90 ntBASIC4.14□□□□□ -1.75
ACTBP60709 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.14□□□□□ -1.75
ACTBP60709 AC095055.1-201ENST00000603472 1113 ntBASIC4.14□□□□□ -1.75
ACTBP60709 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.14□□□□□ -1.75
ACTBP60709 AC091979.2-201ENST00000607514 214 ntBASIC4.14□□□□□ -1.75
ACTBP60709 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.14□□□□□ -1.75
ACTBP60709 AC243960.7-201ENST00000623532 707 ntBASIC4.14□□□□□ -1.75
ACTBP60709 OR52B5P-202ENST00000641118 1110 ntBASIC4.14□□□□□ -1.75
ACTBP60709 AL672167.1-203ENST00000641299 2975 ntBASIC4.14□□□□□ -1.75
ACTBP60709 AC007382.1-201ENST00000624376 2618 ntBASIC4.14□□□□□ -1.75
ACTBP60709 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.14□□□□□ -1.75
ACTBP60709 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
ACTBP60709 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.13□□□□□ -1.75
ACTBP60709 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
ACTBP60709 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ACTBP60709 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
ACTBP60709 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ACTBP60709 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
ACTBP60709 MIR223-201ENST00000385204 110 ntBASIC4.13□□□□□ -1.75
ACTBP60709 DUTP5-201ENST00000406790 469 ntBASIC4.13□□□□□ -1.75
ACTBP60709 AL139039.2-201ENST00000407436 479 ntBASIC4.13□□□□□ -1.75
ACTBP60709 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
ACTBP60709 RN7SKP114-201ENST00000410327 279 ntBASIC4.13□□□□□ -1.75
ACTBP60709 RN7SKP229-201ENST00000410465 302 ntBASIC4.13□□□□□ -1.75
ACTBP60709 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ACTBP60709 OR2AM1P-201ENST00000422137 422 ntBASIC4.13□□□□□ -1.75
ACTBP60709 SEC63P1-201ENST00000425785 1258 ntBASIC4.13□□□□□ -1.75
ACTBP60709 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.13□□□□□ -1.75
ACTBP60709 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ACTBP60709 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.13□□□□□ -1.75
ACTBP60709 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.13□□□□□ -1.75
ACTBP60709 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.13□□□□□ -1.75
ACTBP60709 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ACTBP60709 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.13□□□□□ -1.75
ACTBP60709 SCAND3P1-201ENST00000439854 1060 ntBASIC4.13□□□□□ -1.75
ACTBP60709 FAR2P1-206ENST00000449736 709 ntBASIC4.13□□□□□ -1.75
ACTBP60709 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.13□□□□□ -1.75
ACTBP60709 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.13□□□□□ -1.75
ACTBP60709 SCARNA10-201ENST00000459255 330 ntBASIC4.13□□□□□ -1.75
ACTBP60709 RN7SL172P-201ENST00000460535 303 ntBASIC4.13□□□□□ -1.75
ACTBP60709 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4.13□□□□□ -1.75
ACTBP60709 RPL7AP28-201ENST00000464513 571 ntBASIC4.13□□□□□ -1.75
ACTBP60709 COPS8P2-201ENST00000473228 627 ntBASIC4.13□□□□□ -1.75
ACTBP60709 S100A11P1-201ENST00000477525 312 ntBASIC4.13□□□□□ -1.75
ACTBP60709 RN7SL30P-201ENST00000488416 306 ntBASIC4.13□□□□□ -1.75
ACTBP60709 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.13□□□□□ -1.75
ACTBP60709 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.13□□□□□ -1.75
ACTBP60709 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.13□□□□□ -1.75
ACTBP60709 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
ACTBP60709 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.13□□□□□ -1.75
ACTBP60709 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
ACTBP60709 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.13□□□□□ -1.75
ACTBP60709 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.13□□□□□ -1.75
ACTBP60709 AC084757.1-201ENST00000559987 490 ntBASIC4.13□□□□□ -1.75
ACTBP60709 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.13□□□□□ -1.75
ACTBP60709 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 216.8 ms