Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.61□□□□□ -1.67
CLDN6P56747 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.61□□□□□ -1.67
CLDN6P56747 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN6P56747 AP001804.2-201ENST00000533932 910 ntBASIC4.61□□□□□ -1.67
CLDN6P56747 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN6P56747 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.61□□□□□ -1.67
CLDN6P56747 BNIP3P5-201ENST00000562290 498 ntBASIC4.61□□□□□ -1.67
CLDN6P56747 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.61□□□□□ -1.67
CLDN6P56747 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.61□□□□□ -1.67
CLDN6P56747 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.61□□□□□ -1.67
CLDN6P56747 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.61□□□□□ -1.67
CLDN6P56747 AC100847.1-201ENST00000611316 481 ntBASIC4.61□□□□□ -1.67
CLDN6P56747 MIR6716-201ENST00000613413 80 ntBASIC4.61□□□□□ -1.67
CLDN6P56747 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.61□□□□□ -1.67
CLDN6P56747 AL049794.2-201ENST00000616301 365 ntBASIC4.61□□□□□ -1.67
CLDN6P56747 AC108359.1-201ENST00000616451 1211 ntBASIC4.61□□□□□ -1.67
CLDN6P56747 AL158062.1-201ENST00000619632 745 ntBASIC4.61□□□□□ -1.67
CLDN6P56747 RNU6-368P-201ENST00000620928 107 ntBASIC4.61□□□□□ -1.67
CLDN6P56747 RNU6-538P-201ENST00000622329 107 ntBASIC4.61□□□□□ -1.67
CLDN6P56747 AC002044.3-201ENST00000623314 541 ntBASIC4.61□□□□□ -1.67
CLDN6P56747 AL049536.1-201ENST00000625043 744 ntBASIC4.61□□□□□ -1.67
CLDN6P56747 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN6P56747 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN6P56747 AL122126.1-201ENST00000546905 1318 ntBASIC4.61□□□□□ -1.67
CLDN6P56747 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.61□□□□□ -1.67
CLDN6P56747 AC100871.1-201ENST00000507871 1456 ntBASIC4.61□□□□□ -1.67
CLDN6P56747 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN6P56747 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN6P56747 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN6P56747 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.61□□□□□ -1.67
CLDN6P56747 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CLDN6P56747 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLDN6P56747 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.6□□□□□ -1.67
CLDN6P56747 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.6□□□□□ -1.67
CLDN6P56747 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.6□□□□□ -1.67
CLDN6P56747 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.6□□□□□ -1.67
CLDN6P56747 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLDN6P56747 RNA5SP509-201ENST00000364577 119 ntBASIC4.6□□□□□ -1.67
CLDN6P56747 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CLDN6P56747 AL645608.4-201ENST00000423619 154 ntBASIC4.6□□□□□ -1.67
CLDN6P56747 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CLDN6P56747 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.6□□□□□ -1.67
CLDN6P56747 FTH1P16-201ENST00000435241 552 ntBASIC4.6□□□□□ -1.67
CLDN6P56747 AC046176.1-201ENST00000435260 1170 ntBASIC4.6□□□□□ -1.67
CLDN6P56747 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.6□□□□□ -1.67
CLDN6P56747 AC073052.1-201ENST00000440417 714 ntBASIC4.6□□□□□ -1.67
CLDN6P56747 AC044797.1-201ENST00000445744 679 ntBASIC4.6□□□□□ -1.67
CLDN6P56747 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.6□□□□□ -1.67
CLDN6P56747 BX842559.2-201ENST00000451418 605 ntBASIC4.6□□□□□ -1.67
CLDN6P56747 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLDN6P56747 NIP7P2-201ENST00000485801 544 ntBASIC4.6□□□□□ -1.67
CLDN6P56747 AC104971.1-201ENST00000495117 578 ntBASIC4.6□□□□□ -1.67
CLDN6P56747 AC023424.1-201ENST00000496058 459 ntBASIC4.6□□□□□ -1.67
CLDN6P56747 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.6□□□□□ -1.67
CLDN6P56747 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.6□□□□□ -1.67
CLDN6P56747 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.6□□□□□ -1.67
CLDN6P56747 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.6□□□□□ -1.67
CLDN6P56747 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.6□□□□□ -1.67
CLDN6P56747 A2MP1-204ENST00000566278 4130 ntBASIC4.6□□□□□ -1.67
CLDN6P56747 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLDN6P56747 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLDN6P56747 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.6□□□□□ -1.67
CLDN6P56747 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLDN6P56747 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLDN6P56747 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.6□□□□□ -1.67
CLDN6P56747 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.6□□□□□ -1.67
CLDN6P56747 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.59□□□□□ -1.67
CLDN6P56747 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.59□□□□□ -1.67
CLDN6P56747 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CLDN6P56747 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.67
CLDN6P56747 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CLDN6P56747 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CLDN6P56747 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CLDN6P56747 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CLDN6P56747 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CLDN6P56747 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CLDN6P56747 RNA5SP28-201ENST00000363841 119 ntBASIC4.59□□□□□ -1.67
CLDN6P56747 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CLDN6P56747 SNORA57.1-201ENST00000391227 145 ntBASIC4.59□□□□□ -1.67
CLDN6P56747 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CLDN6P56747 RNA5SP345-201ENST00000410646 108 ntBASIC4.59□□□□□ -1.67
CLDN6P56747 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.59□□□□□ -1.67
CLDN6P56747 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.59□□□□□ -1.67
CLDN6P56747 TTC39DP-201ENST00000416781 1688 ntBASIC4.59□□□□□ -1.67
CLDN6P56747 RAD17P1-201ENST00000418130 2042 ntBASIC4.59□□□□□ -1.67
CLDN6P56747 AL121878.1-201ENST00000418638 859 ntBASIC4.59□□□□□ -1.67
CLDN6P56747 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CLDN6P56747 AC106901.1-201ENST00000425086 698 ntBASIC4.59□□□□□ -1.67
CLDN6P56747 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.59□□□□□ -1.67
CLDN6P56747 AC006484.1-201ENST00000435086 1884 ntBASIC4.59□□□□□ -1.67
CLDN6P56747 RAB9AP5-201ENST00000437794 597 ntBASIC4.59□□□□□ -1.67
CLDN6P56747 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.59□□□□□ -1.67
CLDN6P56747 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.59□□□□□ -1.67
CLDN6P56747 RAB9AP2-201ENST00000443911 597 ntBASIC4.59□□□□□ -1.67
CLDN6P56747 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.59□□□□□ -1.67
CLDN6P56747 CYCSP34-201ENST00000458172 304 ntBASIC4.59□□□□□ -1.67
CLDN6P56747 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.59□□□□□ -1.67
CLDN6P56747 RPL21P126-201ENST00000470049 478 ntBASIC4.59□□□□□ -1.67
CLDN6P56747 AC069304.1-201ENST00000491593 704 ntBASIC4.59□□□□□ -1.67
CLDN6P56747 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms