Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.39□□□□□ -1.55
HDAC4P56524 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HDAC4P56524 AC007618.1-201ENST00000366455 732 ntBASIC5.39□□□□□ -1.55
HDAC4P56524 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HDAC4P56524 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.39□□□□□ -1.55
HDAC4P56524 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.39□□□□□ -1.55
HDAC4P56524 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.39□□□□□ -1.55
HDAC4P56524 RPA2P2-201ENST00000419698 796 ntBASIC5.39□□□□□ -1.55
HDAC4P56524 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
HDAC4P56524 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.39□□□□□ -1.55
HDAC4P56524 AL512637.2-201ENST00000431287 1256 ntBASIC5.39□□□□□ -1.55
HDAC4P56524 AL512661.1-201ENST00000434586 1253 ntBASIC5.39□□□□□ -1.55
HDAC4P56524 CACYBPP1-201ENST00000438592 684 ntBASIC5.39□□□□□ -1.55
HDAC4P56524 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.39□□□□□ -1.55
HDAC4P56524 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.39□□□□□ -1.55
HDAC4P56524 AC012512.1-201ENST00000446594 718 ntBASIC5.39□□□□□ -1.55
HDAC4P56524 AL591363.1-201ENST00000450091 483 ntBASIC5.39□□□□□ -1.55
HDAC4P56524 AL606490.1-201ENST00000452266 765 ntBASIC5.39□□□□□ -1.55
HDAC4P56524 AC092691.2-201ENST00000461787 803 ntBASIC5.39□□□□□ -1.55
HDAC4P56524 ATP5G1P3-201ENST00000463301 410 ntBASIC5.39□□□□□ -1.55
HDAC4P56524 AC072052.1-201ENST00000496556 306 ntBASIC5.39□□□□□ -1.55
HDAC4P56524 AC093801.2-201ENST00000503966 1050 ntBASIC5.39□□□□□ -1.55
HDAC4P56524 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.39□□□□□ -1.55
HDAC4P56524 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.39□□□□□ -1.55
HDAC4P56524 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.39□□□□□ -1.55
HDAC4P56524 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.39□□□□□ -1.55
HDAC4P56524 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HDAC4P56524 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.39□□□□□ -1.55
HDAC4P56524 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
HDAC4P56524 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.39□□□□□ -1.55
HDAC4P56524 AC068339.2-201ENST00000534395 618 ntBASIC5.39□□□□□ -1.55
HDAC4P56524 OR11J2P-201ENST00000555298 907 ntBASIC5.39□□□□□ -1.55
HDAC4P56524 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.39□□□□□ -1.55
HDAC4P56524 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HDAC4P56524 AC127024.5-201ENST00000580085 462 ntBASIC5.39□□□□□ -1.55
HDAC4P56524 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.39□□□□□ -1.55
HDAC4P56524 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HDAC4P56524 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.39□□□□□ -1.55
HDAC4P56524 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.39□□□□□ -1.55
HDAC4P56524 AC126915.2-201ENST00000610957 190 ntBASIC5.39□□□□□ -1.55
HDAC4P56524 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.39□□□□□ -1.55
HDAC4P56524 AP002505.2-201ENST00000623585 696 ntBASIC5.39□□□□□ -1.55
HDAC4P56524 RPL23AP61-201ENST00000623642 466 ntBASIC5.39□□□□□ -1.55
HDAC4P56524 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.39□□□□□ -1.55
HDAC4P56524 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.39□□□□□ -1.55
HDAC4P56524 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
HDAC4P56524 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
HDAC4P56524 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
HDAC4P56524 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HDAC4P56524 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HDAC4P56524 AL450345.1-202ENST00000605741 3881 ntBASIC5.39□□□□□ -1.55
HDAC4P56524 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HDAC4P56524 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HDAC4P56524 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HDAC4P56524 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.38□□□□□ -1.55
HDAC4P56524 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.38□□□□□ -1.55
HDAC4P56524 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HDAC4P56524 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
HDAC4P56524 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HDAC4P56524 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HDAC4P56524 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HDAC4P56524 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
HDAC4P56524 SNORA70-201ENST00000384436 135 ntBASIC5.38□□□□□ -1.55
HDAC4P56524 MIR600-201ENST00000385007 98 ntBASIC5.38□□□□□ -1.55
HDAC4P56524 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
HDAC4P56524 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.38□□□□□ -1.55
HDAC4P56524 TAF9BP2-201ENST00000400856 499 ntBASIC5.38□□□□□ -1.55
HDAC4P56524 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.38□□□□□ -1.55
HDAC4P56524 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.38□□□□□ -1.55
HDAC4P56524 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.38□□□□□ -1.55
HDAC4P56524 PCNPP4-201ENST00000414817 517 ntBASIC5.38□□□□□ -1.55
HDAC4P56524 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.38□□□□□ -1.55
HDAC4P56524 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC5.38□□□□□ -1.55
HDAC4P56524 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.38□□□□□ -1.55
HDAC4P56524 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.38□□□□□ -1.55
HDAC4P56524 AC009238.2-201ENST00000431026 355 ntBASIC5.38□□□□□ -1.55
HDAC4P56524 RPL34P6-201ENST00000432390 345 ntBASIC5.38□□□□□ -1.55
HDAC4P56524 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.38□□□□□ -1.55
HDAC4P56524 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.38□□□□□ -1.55
HDAC4P56524 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.38□□□□□ -1.55
HDAC4P56524 MOB1AP2-201ENST00000446060 614 ntBASIC5.38□□□□□ -1.55
HDAC4P56524 AL157827.1-201ENST00000447622 132 ntBASIC5.38□□□□□ -1.55
HDAC4P56524 FAR2P1-206ENST00000449736 709 ntBASIC5.38□□□□□ -1.55
HDAC4P56524 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.38□□□□□ -1.55
HDAC4P56524 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.38□□□□□ -1.55
HDAC4P56524 AC009127.1-201ENST00000467090 155 ntBASIC5.38□□□□□ -1.55
HDAC4P56524 NIP7P2-201ENST00000485801 544 ntBASIC5.38□□□□□ -1.55
HDAC4P56524 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.38□□□□□ -1.55
HDAC4P56524 NDUFB5P1-201ENST00000508134 564 ntBASIC5.38□□□□□ -1.55
HDAC4P56524 AC100784.1-201ENST00000522790 310 ntBASIC5.38□□□□□ -1.55
HDAC4P56524 UBTFL9-201ENST00000534504 1148 ntBASIC5.38□□□□□ -1.55
HDAC4P56524 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.38□□□□□ -1.55
HDAC4P56524 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.38□□□□□ -1.55
HDAC4P56524 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.38□□□□□ -1.55
HDAC4P56524 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.38□□□□□ -1.55
HDAC4P56524 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
HDAC4P56524 MIR1269B-201ENST00000580405 75 ntBASIC5.38□□□□□ -1.55
HDAC4P56524 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.38□□□□□ -1.55
HDAC4P56524 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC5.38□□□□□ -1.55
HDAC4P56524 AC006116.7-201ENST00000590141 756 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms