Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.89□□□□□ -1.63
CDH12P55289 AP001636.2-201ENST00000525517 696 ntBASIC4.89□□□□□ -1.63
CDH12P55289 AC027026.1-201ENST00000532323 742 ntBASIC4.89□□□□□ -1.63
CDH12P55289 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.89□□□□□ -1.63
CDH12P55289 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.89□□□□□ -1.63
CDH12P55289 LSM3P2-201ENST00000551246 273 ntBASIC4.89□□□□□ -1.63
CDH12P55289 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.89□□□□□ -1.63
CDH12P55289 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.89□□□□□ -1.63
CDH12P55289 AP002884.5-201ENST00000595053 1132 ntBASIC4.89□□□□□ -1.63
CDH12P55289 AC245036.5-201ENST00000596330 847 ntBASIC4.89□□□□□ -1.63
CDH12P55289 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.89□□□□□ -1.63
CDH12P55289 AC011626.1-201ENST00000604710 562 ntBASIC4.89□□□□□ -1.63
CDH12P55289 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
CDH12P55289 AC073569.3-201ENST00000619055 682 ntBASIC4.89□□□□□ -1.63
CDH12P55289 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.89□□□□□ -1.63
CDH12P55289 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.89□□□□□ -1.63
CDH12P55289 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.89□□□□□ -1.63
CDH12P55289 ZNF733P-202ENST00000444809 1573 ntBASIC4.89□□□□□ -1.63
CDH12P55289 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CDH12P55289 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CDH12P55289 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDH12P55289 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDH12P55289 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.89□□□□□ -1.63
CDH12P55289 CASC19-248ENST00000641674 1356 ntBASIC4.89□□□□□ -1.63
CDH12P55289 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDH12P55289 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDH12P55289 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.88□□□□□ -1.63
CDH12P55289 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDH12P55289 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH12P55289 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDH12P55289 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.88□□□□□ -1.63
CDH12P55289 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDH12P55289 AL731532.2-201ENST00000623542 1953 ntBASIC4.88□□□□□ -1.63
CDH12P55289 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CDH12P55289 AC017079.1-201ENST00000333650 415 ntBASIC4.88□□□□□ -1.63
CDH12P55289 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CDH12P55289 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH12P55289 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
CDH12P55289 MIR513B-201ENST00000385136 84 ntBASIC4.88□□□□□ -1.63
CDH12P55289 SNORD65C-201ENST00000390962 71 ntBASIC4.88□□□□□ -1.63
CDH12P55289 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
CDH12P55289 RPL7P27-201ENST00000403775 720 ntBASIC4.88□□□□□ -1.63
CDH12P55289 CTSL3P-202ENST00000412179 788 ntBASIC4.88□□□□□ -1.63
CDH12P55289 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.88□□□□□ -1.63
CDH12P55289 MTCO2P21-201ENST00000419780 677 ntBASIC4.88□□□□□ -1.63
CDH12P55289 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.88□□□□□ -1.63
CDH12P55289 GNG5P5-201ENST00000420444 220 ntBASIC4.88□□□□□ -1.63
CDH12P55289 AC104333.2-201ENST00000422630 192 ntBASIC4.88□□□□□ -1.63
CDH12P55289 RPL12P28-201ENST00000430852 489 ntBASIC4.88□□□□□ -1.63
CDH12P55289 RPL23AP19-201ENST00000436229 369 ntBASIC4.88□□□□□ -1.63
CDH12P55289 MTCO2P20-201ENST00000437339 673 ntBASIC4.88□□□□□ -1.63
CDH12P55289 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.88□□□□□ -1.63
CDH12P55289 GAPDHP58-201ENST00000438477 1006 ntBASIC4.88□□□□□ -1.63
CDH12P55289 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.88□□□□□ -1.63
CDH12P55289 AC012512.1-201ENST00000446594 718 ntBASIC4.88□□□□□ -1.63
CDH12P55289 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.88□□□□□ -1.63
CDH12P55289 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH12P55289 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH12P55289 AC108161.1-201ENST00000461060 402 ntBASIC4.88□□□□□ -1.63
CDH12P55289 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDH12P55289 RPL21P131-201ENST00000497298 483 ntBASIC4.88□□□□□ -1.63
CDH12P55289 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDH12P55289 AC074087.1-201ENST00000512059 724 ntBASIC4.88□□□□□ -1.63
CDH12P55289 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.88□□□□□ -1.63
CDH12P55289 AC112191.2-201ENST00000522428 333 ntBASIC4.88□□□□□ -1.63
CDH12P55289 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.88□□□□□ -1.63
CDH12P55289 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.88□□□□□ -1.63
CDH12P55289 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH12P55289 AC005341.1-201ENST00000571086 708 ntBASIC4.88□□□□□ -1.63
CDH12P55289 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH12P55289 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.88□□□□□ -1.63
CDH12P55289 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH12P55289 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH12P55289 AC113368.1-201ENST00000603736 382 ntBASIC4.88□□□□□ -1.63
CDH12P55289 AC005377.1-201ENST00000605126 456 ntBASIC4.88□□□□□ -1.63
CDH12P55289 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDH12P55289 AL356274.1-201ENST00000617064 410 ntBASIC4.88□□□□□ -1.63
CDH12P55289 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.88□□□□□ -1.63
CDH12P55289 MIR1910-201ENST00000636955 80 ntBASIC4.88□□□□□ -1.63
CDH12P55289 MTND2P41-201ENST00000637599 773 ntBASIC4.88□□□□□ -1.63
CDH12P55289 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDH12P55289 AC007342.5-201ENST00000571340 2142 ntBASIC4.88□□□□□ -1.63
CDH12P55289 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDH12P55289 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH12P55289 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH12P55289 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.88□□□□□ -1.63
CDH12P55289 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDH12P55289 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDH12P55289 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDH12P55289 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.87□□□□□ -1.63
CDH12P55289 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.87□□□□□ -1.63
CDH12P55289 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH12P55289 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.87□□□□□ -1.63
CDH12P55289 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CDH12P55289 AL022322.2-201ENST00000624072 20397 ntBASIC4.87□□□□□ -1.63
CDH12P55289 UGT2B26P-201ENST00000508672 1613 ntBASIC4.87□□□□□ -1.63
CDH12P55289 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CDH12P55289 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.87□□□□□ -1.63
CDH12P55289 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.87□□□□□ -1.63
CDH12P55289 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms