Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
VCPP55072 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.3□□□□□ -1.56
VCPP55072 AP005262.1-201ENST00000582646 997 ntBASIC5.3□□□□□ -1.56
VCPP55072 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC5.3□□□□□ -1.56
VCPP55072 AL137072.1-201ENST00000603444 466 ntBASIC5.3□□□□□ -1.56
VCPP55072 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC5.3□□□□□ -1.56
VCPP55072 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.3□□□□□ -1.56
VCPP55072 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.3□□□□□ -1.56
VCPP55072 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VCPP55072 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VCPP55072 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.3□□□□□ -1.56
VCPP55072 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VCPP55072 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
VCPP55072 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.29□□□□□ -1.56
VCPP55072 SCARNA15-201ENST00000607520 4325 ntBASIC5.29□□□□□ -1.56
VCPP55072 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VCPP55072 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.29□□□□□ -1.56
VCPP55072 OR13C3-201ENST00000374781 1108 ntBASIC5.29□□□□□ -1.56
VCPP55072 SNORA57.1-201ENST00000391227 145 ntBASIC5.29□□□□□ -1.56
VCPP55072 AC096644.3-201ENST00000416788 338 ntBASIC5.29□□□□□ -1.56
VCPP55072 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.29□□□□□ -1.56
VCPP55072 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.29□□□□□ -1.56
VCPP55072 BX323845.1-201ENST00000432417 179 ntBASIC5.29□□□□□ -1.56
VCPP55072 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.29□□□□□ -1.56
VCPP55072 GTF3AP5-201ENST00000442645 697 ntBASIC5.29□□□□□ -1.56
VCPP55072 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.29□□□□□ -1.56
VCPP55072 BTF3P6-201ENST00000448054 499 ntBASIC5.29□□□□□ -1.56
VCPP55072 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VCPP55072 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VCPP55072 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.29□□□□□ -1.56
VCPP55072 IGKV1-32-201ENST00000519290 311 ntBASIC5.29□□□□□ -1.56
VCPP55072 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VCPP55072 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.29□□□□□ -1.56
VCPP55072 AC084033.1-201ENST00000550830 633 ntBASIC5.29□□□□□ -1.56
VCPP55072 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.29□□□□□ -1.56
VCPP55072 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.29□□□□□ -1.56
VCPP55072 SNORD39.2-201ENST00000579995 76 ntBASIC5.29□□□□□ -1.56
VCPP55072 MIR4715-201ENST00000584117 79 ntBASIC5.29□□□□□ -1.56
VCPP55072 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.29□□□□□ -1.56
VCPP55072 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.29□□□□□ -1.56
VCPP55072 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.29□□□□□ -1.56
VCPP55072 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.29□□□□□ -1.56
VCPP55072 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.29□□□□□ -1.56
VCPP55072 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
VCPP55072 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VCPP55072 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
VCPP55072 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VCPP55072 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VCPP55072 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.29□□□□□ -1.56
VCPP55072 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
VCPP55072 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VCPP55072 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.29□□□□□ -1.56
VCPP55072 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.29□□□□□ -1.56
VCPP55072 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.29□□□□□ -1.56
VCPP55072 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VCPP55072 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VCPP55072 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VCPP55072 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VCPP55072 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
VCPP55072 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.28□□□□□ -1.56
VCPP55072 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
VCPP55072 SNORA37-201ENST00000384504 129 ntBASIC5.28□□□□□ -1.56
VCPP55072 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VCPP55072 RAB9AP4-201ENST00000415230 609 ntBASIC5.28□□□□□ -1.56
VCPP55072 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.28□□□□□ -1.56
VCPP55072 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VCPP55072 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.28□□□□□ -1.56
VCPP55072 NPM1P39-201ENST00000449818 867 ntBASIC5.28□□□□□ -1.56
VCPP55072 AC073073.1-201ENST00000493920 463 ntBASIC5.28□□□□□ -1.56
VCPP55072 AP000926.3-201ENST00000497201 299 ntBASIC5.28□□□□□ -1.56
VCPP55072 AK3P4-201ENST00000504283 583 ntBASIC5.28□□□□□ -1.56
VCPP55072 AC010350.1-201ENST00000504908 231 ntBASIC5.28□□□□□ -1.56
VCPP55072 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.28□□□□□ -1.56
VCPP55072 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.28□□□□□ -1.56
VCPP55072 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.28□□□□□ -1.56
VCPP55072 OR7E128P-201ENST00000532736 1024 ntBASIC5.28□□□□□ -1.56
VCPP55072 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.28□□□□□ -1.56
VCPP55072 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.28□□□□□ -1.56
VCPP55072 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.28□□□□□ -1.56
VCPP55072 AL109766.1-201ENST00000555080 552 ntBASIC5.28□□□□□ -1.56
VCPP55072 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.28□□□□□ -1.56
VCPP55072 AC020915.5-201ENST00000596836 964 ntBASIC5.28□□□□□ -1.56
VCPP55072 AC010615.3-201ENST00000597319 394 ntBASIC5.28□□□□□ -1.56
VCPP55072 AC105254.2-201ENST00000603636 436 ntBASIC5.28□□□□□ -1.56
VCPP55072 AC005962.2-201ENST00000611427 652 ntBASIC5.28□□□□□ -1.56
VCPP55072 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.28□□□□□ -1.56
VCPP55072 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
VCPP55072 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.28□□□□□ -1.56
VCPP55072 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.28□□□□□ -1.56
VCPP55072 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VCPP55072 AC104118.1-201ENST00000607625 1589 ntBASIC5.28□□□□□ -1.56
VCPP55072 AC011447.7-201ENST00000624228 1590 ntBASIC5.28□□□□□ -1.56
VCPP55072 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
VCPP55072 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
VCPP55072 AC139713.2-214ENST00000642059 1811 ntBASIC5.27□□□□□ -1.57
VCPP55072 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VCPP55072 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VCPP55072 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.27□□□□□ -1.57
VCPP55072 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
VCPP55072 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms