Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.32□□□□□ -1.56
HMGCS2P54868 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.32□□□□□ -1.56
HMGCS2P54868 AC023043.4-201ENST00000612081 449 ntBASIC5.32□□□□□ -1.56
HMGCS2P54868 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.32□□□□□ -1.56
HMGCS2P54868 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.32□□□□□ -1.56
HMGCS2P54868 ZYXP1-201ENST00000617638 118 ntBASIC5.32□□□□□ -1.56
HMGCS2P54868 FRG1EP-201ENST00000634469 770 ntBASIC5.32□□□□□ -1.56
HMGCS2P54868 STX3-208ENST00000641815 3236 ntBASIC5.32□□□□□ -1.56
HMGCS2P54868 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMGCS2P54868 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HMGCS2P54868 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMGCS2P54868 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.32□□□□□ -1.56
HMGCS2P54868 ADAM24P-201ENST00000398655 2101 ntBASIC5.32□□□□□ -1.56
HMGCS2P54868 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.32□□□□□ -1.56
HMGCS2P54868 AC097063.1-201ENST00000426714 1797 ntBASIC5.32□□□□□ -1.56
HMGCS2P54868 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMGCS2P54868 AP000756.2-201ENST00000624168 2567 ntBASIC5.31□□□□□ -1.56
HMGCS2P54868 AL391684.1-202ENST00000641293 1636 ntBASIC5.31□□□□□ -1.56
HMGCS2P54868 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HMGCS2P54868 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.31□□□□□ -1.56
HMGCS2P54868 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HMGCS2P54868 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
HMGCS2P54868 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMGCS2P54868 RNA5SP388-201ENST00000362584 119 ntBASIC5.31□□□□□ -1.56
HMGCS2P54868 AP000580.1-201ENST00000404439 358 ntBASIC5.31□□□□□ -1.56
HMGCS2P54868 AMZ2P2-201ENST00000406819 1057 ntBASIC5.31□□□□□ -1.56
HMGCS2P54868 U3.35-201ENST00000408405 208 ntBASIC5.31□□□□□ -1.56
HMGCS2P54868 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.31□□□□□ -1.56
HMGCS2P54868 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.31□□□□□ -1.56
HMGCS2P54868 OR6C71P-201ENST00000432580 913 ntBASIC5.31□□□□□ -1.56
HMGCS2P54868 RPS3AP54-201ENST00000435535 734 ntBASIC5.31□□□□□ -1.56
HMGCS2P54868 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.31□□□□□ -1.56
HMGCS2P54868 AC122718.1-201ENST00000439448 744 ntBASIC5.31□□□□□ -1.56
HMGCS2P54868 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMGCS2P54868 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.31□□□□□ -1.56
HMGCS2P54868 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.31□□□□□ -1.56
HMGCS2P54868 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.31□□□□□ -1.56
HMGCS2P54868 RN7SL98P-201ENST00000462271 300 ntBASIC5.31□□□□□ -1.56
HMGCS2P54868 FAM133DP-201ENST00000464802 691 ntBASIC5.31□□□□□ -1.56
HMGCS2P54868 AC007537.2-201ENST00000472093 511 ntBASIC5.31□□□□□ -1.56
HMGCS2P54868 HMGB3P14-201ENST00000494195 599 ntBASIC5.31□□□□□ -1.56
HMGCS2P54868 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.31□□□□□ -1.56
HMGCS2P54868 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.31□□□□□ -1.56
HMGCS2P54868 AC093815.1-201ENST00000508637 280 ntBASIC5.31□□□□□ -1.56
HMGCS2P54868 MRPL49P2-201ENST00000521066 465 ntBASIC5.31□□□□□ -1.56
HMGCS2P54868 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.31□□□□□ -1.56
HMGCS2P54868 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.31□□□□□ -1.56
HMGCS2P54868 PSMB7P1-201ENST00000556349 514 ntBASIC5.31□□□□□ -1.56
HMGCS2P54868 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.31□□□□□ -1.56
HMGCS2P54868 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.31□□□□□ -1.56
HMGCS2P54868 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.31□□□□□ -1.56
HMGCS2P54868 AC115989.2-201ENST00000578640 563 ntBASIC5.31□□□□□ -1.56
HMGCS2P54868 IPO5P1-202ENST00000600039 287 ntBASIC5.31□□□□□ -1.56
HMGCS2P54868 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.31□□□□□ -1.56
HMGCS2P54868 AL161912.3-201ENST00000605404 628 ntBASIC5.31□□□□□ -1.56
HMGCS2P54868 OR8G7P-201ENST00000616658 848 ntBASIC5.31□□□□□ -1.56
HMGCS2P54868 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.31□□□□□ -1.56
HMGCS2P54868 Z95331.1-201ENST00000623075 23112 ntBASIC5.31□□□□□ -1.56
HMGCS2P54868 AP005432.1-201ENST00000580891 3485 ntBASIC5.31□□□□□ -1.56
HMGCS2P54868 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMGCS2P54868 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.3□□□□□ -1.56
HMGCS2P54868 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGCS2P54868 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.3□□□□□ -1.56
HMGCS2P54868 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
HMGCS2P54868 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
HMGCS2P54868 AC090017.1-201ENST00000548612 1779 ntBASIC5.3□□□□□ -1.56
HMGCS2P54868 RNU1-130P-201ENST00000363930 160 ntBASIC5.3□□□□□ -1.56
HMGCS2P54868 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.3□□□□□ -1.56
HMGCS2P54868 SNORA37-201ENST00000384504 129 ntBASIC5.3□□□□□ -1.56
HMGCS2P54868 SDHCP2-201ENST00000398565 501 ntBASIC5.3□□□□□ -1.56
HMGCS2P54868 CBX1P3-201ENST00000413296 527 ntBASIC5.3□□□□□ -1.56
HMGCS2P54868 AL358176.3-201ENST00000420757 454 ntBASIC5.3□□□□□ -1.56
HMGCS2P54868 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.3□□□□□ -1.56
HMGCS2P54868 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.3□□□□□ -1.56
HMGCS2P54868 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.3□□□□□ -1.56
HMGCS2P54868 PHBP16-201ENST00000446318 950 ntBASIC5.3□□□□□ -1.56
HMGCS2P54868 AC009963.4-201ENST00000448535 339 ntBASIC5.3□□□□□ -1.56
HMGCS2P54868 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.3□□□□□ -1.56
HMGCS2P54868 RPL7P19-201ENST00000469948 618 ntBASIC5.3□□□□□ -1.56
HMGCS2P54868 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.3□□□□□ -1.56
HMGCS2P54868 CR383656.1-201ENST00000484916 377 ntBASIC5.3□□□□□ -1.56
HMGCS2P54868 AC097486.1-201ENST00000515331 210 ntBASIC5.3□□□□□ -1.56
HMGCS2P54868 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.3□□□□□ -1.56
HMGCS2P54868 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.3□□□□□ -1.56
HMGCS2P54868 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
HMGCS2P54868 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.3□□□□□ -1.56
HMGCS2P54868 AP001160.4-201ENST00000596971 382 ntBASIC5.3□□□□□ -1.56
HMGCS2P54868 VN1R85P-201ENST00000601587 426 ntBASIC5.3□□□□□ -1.56
HMGCS2P54868 AC024941.1-201ENST00000612250 334 ntBASIC5.3□□□□□ -1.56
HMGCS2P54868 AC245389.2-201ENST00000616023 576 ntBASIC5.3□□□□□ -1.56
HMGCS2P54868 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
HMGCS2P54868 AC242843.1-201ENST00000618702 573 ntBASIC5.3□□□□□ -1.56
HMGCS2P54868 AL161637.1-201ENST00000622380 412 ntBASIC5.3□□□□□ -1.56
HMGCS2P54868 LINC01808-202ENST00000641680 1116 ntBASIC5.3□□□□□ -1.56
HMGCS2P54868 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.3□□□□□ -1.56
HMGCS2P54868 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.3□□□□□ -1.56
HMGCS2P54868 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.3□□□□□ -1.56
HMGCS2P54868 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
HMGCS2P54868 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
HMGCS2P54868 AL442128.2-201ENST00000620246 1824 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms