Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 HMGB1P20-201ENST00000402555 677 ntBASIC6.19□□□□□ -1.42
EPHB3P54753 HMGN1P14-201ENST00000412459 517 ntBASIC6.19□□□□□ -1.42
EPHB3P54753 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.19□□□□□ -1.42
EPHB3P54753 RPL7P30-201ENST00000420888 709 ntBASIC6.19□□□□□ -1.42
EPHB3P54753 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.19□□□□□ -1.42
EPHB3P54753 AC002504.1-201ENST00000438281 691 ntBASIC6.19□□□□□ -1.42
EPHB3P54753 AC241584.1-201ENST00000438469 1241 ntBASIC6.19□□□□□ -1.42
EPHB3P54753 GTF3AP5-201ENST00000442645 697 ntBASIC6.19□□□□□ -1.42
EPHB3P54753 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
EPHB3P54753 BUD31P2-201ENST00000449374 300 ntBASIC6.19□□□□□ -1.42
EPHB3P54753 RPL7P1-201ENST00000468161 747 ntBASIC6.19□□□□□ -1.42
EPHB3P54753 RPL7P9-201ENST00000468715 747 ntBASIC6.19□□□□□ -1.42
EPHB3P54753 CCDC75P1-201ENST00000469247 791 ntBASIC6.19□□□□□ -1.42
EPHB3P54753 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
EPHB3P54753 BNIP3P41-201ENST00000503774 571 ntBASIC6.19□□□□□ -1.42
EPHB3P54753 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.19□□□□□ -1.42
EPHB3P54753 AC125612.1-201ENST00000547580 377 ntBASIC6.19□□□□□ -1.42
EPHB3P54753 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC6.19□□□□□ -1.42
EPHB3P54753 BGLT3-201ENST00000564523 994 ntBASIC6.19□□□□□ -1.42
EPHB3P54753 MTND1P15-201ENST00000579262 949 ntBASIC6.19□□□□□ -1.42
EPHB3P54753 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.19□□□□□ -1.42
EPHB3P54753 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC6.19□□□□□ -1.42
EPHB3P54753 AC078795.3-201ENST00000602913 472 ntBASIC6.19□□□□□ -1.42
EPHB3P54753 U73023.1-201ENST00000603134 700 ntBASIC6.19□□□□□ -1.42
EPHB3P54753 AC005034.5-201ENST00000604219 466 ntBASIC6.19□□□□□ -1.42
EPHB3P54753 AC018618.2-201ENST00000604770 446 ntBASIC6.19□□□□□ -1.42
EPHB3P54753 AL139418.1-201ENST00000613613 177 ntBASIC6.19□□□□□ -1.42
EPHB3P54753 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC6.19□□□□□ -1.42
EPHB3P54753 AC009120.7-201ENST00000623452 780 ntBASIC6.19□□□□□ -1.42
EPHB3P54753 AL691477.1-201ENST00000624398 162 ntBASIC6.19□□□□□ -1.42
EPHB3P54753 AC015726.3-201ENST00000624501 418 ntBASIC6.19□□□□□ -1.42
EPHB3P54753 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.19□□□□□ -1.42
EPHB3P54753 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC6.19□□□□□ -1.42
EPHB3P54753 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
EPHB3P54753 LINC01808-202ENST00000641680 1116 ntBASIC6.19□□□□□ -1.42
EPHB3P54753 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
EPHB3P54753 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
EPHB3P54753 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.19□□□□□ -1.42
EPHB3P54753 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
EPHB3P54753 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
EPHB3P54753 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
EPHB3P54753 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.19□□□□□ -1.42
EPHB3P54753 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
EPHB3P54753 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
EPHB3P54753 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
EPHB3P54753 ZNF101P1-201ENST00000435701 1720 ntBASIC6.19□□□□□ -1.42
EPHB3P54753 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
EPHB3P54753 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
EPHB3P54753 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
EPHB3P54753 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.19□□□□□ -1.42
EPHB3P54753 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
EPHB3P54753 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
EPHB3P54753 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.18□□□□□ -1.42
EPHB3P54753 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
EPHB3P54753 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
EPHB3P54753 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
EPHB3P54753 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.18□□□□□ -1.42
EPHB3P54753 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
EPHB3P54753 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.18□□□□□ -1.42
EPHB3P54753 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.18□□□□□ -1.42
EPHB3P54753 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.18□□□□□ -1.42
EPHB3P54753 RNA5SP46-201ENST00000362370 120 ntBASIC6.18□□□□□ -1.42
EPHB3P54753 RNA5SP394-201ENST00000364216 119 ntBASIC6.18□□□□□ -1.42
EPHB3P54753 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.18□□□□□ -1.42
EPHB3P54753 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.18□□□□□ -1.42
EPHB3P54753 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
EPHB3P54753 HMGA1P8-201ENST00000414130 321 ntBASIC6.18□□□□□ -1.42
EPHB3P54753 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.18□□□□□ -1.42
EPHB3P54753 OR4K6P-201ENST00000416478 897 ntBASIC6.18□□□□□ -1.42
EPHB3P54753 RPS17P17-201ENST00000419392 409 ntBASIC6.18□□□□□ -1.42
EPHB3P54753 NME1P1-201ENST00000420914 382 ntBASIC6.18□□□□□ -1.42
EPHB3P54753 MTCO3P1-205ENST00000422088 832 ntBASIC6.18□□□□□ -1.42
EPHB3P54753 AC127526.2-201ENST00000426436 775 ntBASIC6.18□□□□□ -1.42
EPHB3P54753 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.18□□□□□ -1.42
EPHB3P54753 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.18□□□□□ -1.42
EPHB3P54753 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC6.18□□□□□ -1.42
EPHB3P54753 UBE2V1P8-201ENST00000437166 265 ntBASIC6.18□□□□□ -1.42
EPHB3P54753 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.18□□□□□ -1.42
EPHB3P54753 AC023141.8-201ENST00000442554 208 ntBASIC6.18□□□□□ -1.42
EPHB3P54753 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.18□□□□□ -1.42
EPHB3P54753 OR51B8P-201ENST00000449892 769 ntBASIC6.18□□□□□ -1.42
EPHB3P54753 AC093166.4-201ENST00000457867 318 ntBASIC6.18□□□□□ -1.42
EPHB3P54753 TPT1P7-201ENST00000458300 517 ntBASIC6.18□□□□□ -1.42
EPHB3P54753 AC041039.1-201ENST00000485656 536 ntBASIC6.18□□□□□ -1.42
EPHB3P54753 RPS26P24-201ENST00000497656 331 ntBASIC6.18□□□□□ -1.42
EPHB3P54753 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC6.18□□□□□ -1.42
EPHB3P54753 KRT19P6-201ENST00000510983 209 ntBASIC6.18□□□□□ -1.42
EPHB3P54753 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.18□□□□□ -1.42
EPHB3P54753 AP001646.1-201ENST00000527936 915 ntBASIC6.18□□□□□ -1.42
EPHB3P54753 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC6.18□□□□□ -1.42
EPHB3P54753 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.18□□□□□ -1.42
EPHB3P54753 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.18□□□□□ -1.42
EPHB3P54753 IGBP1P1-201ENST00000554337 1009 ntBASIC6.18□□□□□ -1.42
EPHB3P54753 NPM1P5-201ENST00000557228 838 ntBASIC6.18□□□□□ -1.42
EPHB3P54753 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC6.18□□□□□ -1.42
EPHB3P54753 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.18□□□□□ -1.42
EPHB3P54753 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC6.18□□□□□ -1.42
EPHB3P54753 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
EPHB3P54753 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.18□□□□□ -1.42
EPHB3P54753 MIR4505-201ENST00000582238 73 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 144.8 ms