Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 FAM183DP-201ENST00000421987 399 ntBASIC4.46□□□□□ -1.7
HOXA1P49639 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXA1P49639 IPMKP1-201ENST00000425988 855 ntBASIC4.46□□□□□ -1.7
HOXA1P49639 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXA1P49639 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXA1P49639 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXA1P49639 AC245047.2-201ENST00000441060 530 ntBASIC4.46□□□□□ -1.7
HOXA1P49639 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXA1P49639 AL591719.1-201ENST00000444669 744 ntBASIC4.46□□□□□ -1.7
HOXA1P49639 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HOXA1P49639 LRRC37A14P-201ENST00000452297 462 ntBASIC4.46□□□□□ -1.7
HOXA1P49639 Z95152.1-201ENST00000453556 656 ntBASIC4.46□□□□□ -1.7
HOXA1P49639 PPIAP27-201ENST00000453800 265 ntBASIC4.46□□□□□ -1.7
HOXA1P49639 AL445433.1-201ENST00000457507 257 ntBASIC4.46□□□□□ -1.7
HOXA1P49639 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4.46□□□□□ -1.7
HOXA1P49639 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXA1P49639 AC022215.1-201ENST00000481770 362 ntBASIC4.46□□□□□ -1.7
HOXA1P49639 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXA1P49639 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.46□□□□□ -1.7
HOXA1P49639 IGKV3D-25-201ENST00000519599 235 ntBASIC4.46□□□□□ -1.7
HOXA1P49639 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXA1P49639 OR8K4P-201ENST00000534608 872 ntBASIC4.46□□□□□ -1.7
HOXA1P49639 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXA1P49639 DUX4L52-201ENST00000549363 777 ntBASIC4.46□□□□□ -1.7
HOXA1P49639 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXA1P49639 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXA1P49639 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXA1P49639 AL049830.4-201ENST00000555149 351 ntBASIC4.46□□□□□ -1.7
HOXA1P49639 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXA1P49639 AL845552.1-201ENST00000556820 323 ntBASIC4.46□□□□□ -1.7
HOXA1P49639 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXA1P49639 AL356801.1-201ENST00000559320 294 ntBASIC4.46□□□□□ -1.7
HOXA1P49639 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXA1P49639 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXA1P49639 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
HOXA1P49639 AC134669.1-201ENST00000581275 672 ntBASIC4.46□□□□□ -1.7
HOXA1P49639 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXA1P49639 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXA1P49639 AC004908.3-201ENST00000610248 625 ntBASIC4.46□□□□□ -1.7
HOXA1P49639 AC009464.1-201ENST00000615731 469 ntBASIC4.46□□□□□ -1.7
HOXA1P49639 AC048341.3-201ENST00000619323 491 ntBASIC4.46□□□□□ -1.7
HOXA1P49639 AC008115.4-201ENST00000619780 775 ntBASIC4.46□□□□□ -1.7
HOXA1P49639 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXA1P49639 AC010435.1-201ENST00000623353 1177 ntBASIC4.46□□□□□ -1.7
HOXA1P49639 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4.46□□□□□ -1.7
HOXA1P49639 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXA1P49639 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
HOXA1P49639 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXA1P49639 OR8G3P-202ENST00000641572 1255 ntBASIC4.46□□□□□ -1.7
HOXA1P49639 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXA1P49639 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXA1P49639 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXA1P49639 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
HOXA1P49639 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXA1P49639 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXA1P49639 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXA1P49639 CR788268.1-201ENST00000603931 1809 ntBASIC4.46□□□□□ -1.7
HOXA1P49639 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.45□□□□□ -1.7
HOXA1P49639 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.45□□□□□ -1.7
HOXA1P49639 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HOXA1P49639 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HOXA1P49639 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXA1P49639 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
HOXA1P49639 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXA1P49639 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.45□□□□□ -1.7
HOXA1P49639 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.45□□□□□ -1.7
HOXA1P49639 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXA1P49639 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.45□□□□□ -1.7
HOXA1P49639 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.45□□□□□ -1.7
HOXA1P49639 COX6B1P3-201ENST00000312310 260 ntBASIC4.45□□□□□ -1.7
HOXA1P49639 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXA1P49639 RNA5SP500-201ENST00000364486 119 ntBASIC4.45□□□□□ -1.7
HOXA1P49639 RNA5SP30-201ENST00000365552 115 ntBASIC4.45□□□□□ -1.7
HOXA1P49639 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXA1P49639 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXA1P49639 RNU6-906P-201ENST00000384700 70 ntBASIC4.45□□□□□ -1.7
HOXA1P49639 HMGB3P18-201ENST00000406327 590 ntBASIC4.45□□□□□ -1.7
HOXA1P49639 AL160275.2-201ENST00000412010 394 ntBASIC4.45□□□□□ -1.7
HOXA1P49639 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXA1P49639 RPSAP35-201ENST00000413753 818 ntBASIC4.45□□□□□ -1.7
HOXA1P49639 AC009237.10-201ENST00000414112 510 ntBASIC4.45□□□□□ -1.7
HOXA1P49639 MTATP6P20-201ENST00000414147 562 ntBASIC4.45□□□□□ -1.7
HOXA1P49639 GAPDHP49-201ENST00000421421 961 ntBASIC4.45□□□□□ -1.7
HOXA1P49639 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HOXA1P49639 PNKDP1-201ENST00000435914 430 ntBASIC4.45□□□□□ -1.7
HOXA1P49639 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXA1P49639 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.45□□□□□ -1.7
HOXA1P49639 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC4.45□□□□□ -1.7
HOXA1P49639 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HOXA1P49639 EEF1B2P3-201ENST00000447718 678 ntBASIC4.45□□□□□ -1.7
HOXA1P49639 AL358876.1-201ENST00000453364 1075 ntBASIC4.45□□□□□ -1.7
HOXA1P49639 AC092155.2-201ENST00000454675 477 ntBASIC4.45□□□□□ -1.7
HOXA1P49639 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.45□□□□□ -1.7
HOXA1P49639 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXA1P49639 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXA1P49639 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXA1P49639 RN7SL193P-201ENST00000491708 276 ntBASIC4.45□□□□□ -1.7
HOXA1P49639 AC009120.1-201ENST00000493458 473 ntBASIC4.45□□□□□ -1.7
HOXA1P49639 MTND4LP2-201ENST00000502312 285 ntBASIC4.45□□□□□ -1.7
HOXA1P49639 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 314.2 ms