Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.98□□□□□ -1.61
HNF4AP41235 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.98□□□□□ -1.61
HNF4AP41235 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HNF4AP41235 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
HNF4AP41235 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
HNF4AP41235 AC017079.1-201ENST00000333650 415 ntBASIC4.98□□□□□ -1.61
HNF4AP41235 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
HNF4AP41235 U3.2-201ENST00000362981 210 ntBASIC4.98□□□□□ -1.61
HNF4AP41235 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HNF4AP41235 MIR323B-201ENST00000385269 82 ntBASIC4.98□□□□□ -1.61
HNF4AP41235 SNORA40.4-201ENST00000390971 128 ntBASIC4.98□□□□□ -1.61
HNF4AP41235 DUTP5-201ENST00000406790 469 ntBASIC4.98□□□□□ -1.61
HNF4AP41235 MIR1182-201ENST00000408363 97 ntBASIC4.98□□□□□ -1.61
HNF4AP41235 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.98□□□□□ -1.61
HNF4AP41235 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.98□□□□□ -1.61
HNF4AP41235 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.98□□□□□ -1.61
HNF4AP41235 RN7SKP97-201ENST00000410966 333 ntBASIC4.98□□□□□ -1.61
HNF4AP41235 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HNF4AP41235 AC007738.1-201ENST00000413892 348 ntBASIC4.98□□□□□ -1.61
HNF4AP41235 MTND4P11-201ENST00000417020 1058 ntBASIC4.98□□□□□ -1.61
HNF4AP41235 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.98□□□□□ -1.61
HNF4AP41235 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HNF4AP41235 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.98□□□□□ -1.61
HNF4AP41235 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC4.98□□□□□ -1.61
HNF4AP41235 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.98□□□□□ -1.61
HNF4AP41235 COX6CP13-201ENST00000428703 226 ntBASIC4.98□□□□□ -1.61
HNF4AP41235 RPL34P6-201ENST00000432390 345 ntBASIC4.98□□□□□ -1.61
HNF4AP41235 OR52B5P-201ENST00000435337 951 ntBASIC4.98□□□□□ -1.61
HNF4AP41235 FAR2P1-206ENST00000449736 709 ntBASIC4.98□□□□□ -1.61
HNF4AP41235 AC006511.1-201ENST00000470614 315 ntBASIC4.98□□□□□ -1.61
HNF4AP41235 AC074386.1-201ENST00000476560 767 ntBASIC4.98□□□□□ -1.61
HNF4AP41235 RPS21P4-201ENST00000487122 248 ntBASIC4.98□□□□□ -1.61
HNF4AP41235 RN7SL30P-201ENST00000488416 306 ntBASIC4.98□□□□□ -1.61
HNF4AP41235 AC072052.1-201ENST00000496556 306 ntBASIC4.98□□□□□ -1.61
HNF4AP41235 HIGD1AP14-201ENST00000507617 282 ntBASIC4.98□□□□□ -1.61
HNF4AP41235 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.98□□□□□ -1.61
HNF4AP41235 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.98□□□□□ -1.61
HNF4AP41235 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.98□□□□□ -1.61
HNF4AP41235 AC024940.3-201ENST00000538551 316 ntBASIC4.98□□□□□ -1.61
HNF4AP41235 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.98□□□□□ -1.61
HNF4AP41235 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.98□□□□□ -1.61
HNF4AP41235 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
HNF4AP41235 OR11J2P-201ENST00000555298 907 ntBASIC4.98□□□□□ -1.61
HNF4AP41235 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.98□□□□□ -1.61
HNF4AP41235 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.98□□□□□ -1.61
HNF4AP41235 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.98□□□□□ -1.61
HNF4AP41235 BNIP3P35-201ENST00000604530 490 ntBASIC4.98□□□□□ -1.61
HNF4AP41235 KATNBL1P1-201ENST00000605192 748 ntBASIC4.98□□□□□ -1.61
HNF4AP41235 AL355816.1-201ENST00000607951 118 ntBASIC4.98□□□□□ -1.61
HNF4AP41235 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.98□□□□□ -1.61
HNF4AP41235 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.98□□□□□ -1.61
HNF4AP41235 BMS1P21-201ENST00000634565 365 ntBASIC4.98□□□□□ -1.61
HNF4AP41235 OR52B5P-202ENST00000641118 1110 ntBASIC4.98□□□□□ -1.61
HNF4AP41235 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HNF4AP41235 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HNF4AP41235 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HNF4AP41235 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HNF4AP41235 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
HNF4AP41235 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.98□□□□□ -1.61
HNF4AP41235 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HNF4AP41235 PABPC1P6-201ENST00000445594 1829 ntBASIC4.97□□□□□ -1.61
HNF4AP41235 AL049555.1-201ENST00000562834 1933 ntBASIC4.97□□□□□ -1.61
HNF4AP41235 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HNF4AP41235 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HNF4AP41235 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
HNF4AP41235 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HNF4AP41235 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HNF4AP41235 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
HNF4AP41235 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.97□□□□□ -1.61
HNF4AP41235 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
HNF4AP41235 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HNF4AP41235 RNU6-40P-201ENST00000384254 107 ntBASIC4.97□□□□□ -1.61
HNF4AP41235 AL035079.1-201ENST00000405210 287 ntBASIC4.97□□□□□ -1.61
HNF4AP41235 RN7SKP126-201ENST00000411143 300 ntBASIC4.97□□□□□ -1.61
HNF4AP41235 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.97□□□□□ -1.61
HNF4AP41235 MARK2P12-201ENST00000420129 585 ntBASIC4.97□□□□□ -1.61
HNF4AP41235 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.97□□□□□ -1.61
HNF4AP41235 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.97□□□□□ -1.61
HNF4AP41235 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.97□□□□□ -1.61
HNF4AP41235 ZNF736P11Y-201ENST00000442535 1213 ntBASIC4.97□□□□□ -1.61
HNF4AP41235 ZNF736P12Y-201ENST00000443152 1243 ntBASIC4.97□□□□□ -1.61
HNF4AP41235 AC004980.3-201ENST00000447046 365 ntBASIC4.97□□□□□ -1.61
HNF4AP41235 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.97□□□□□ -1.61
HNF4AP41235 ZNF736P4Y-201ENST00000454995 1243 ntBASIC4.97□□□□□ -1.61
HNF4AP41235 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.97□□□□□ -1.61
HNF4AP41235 RN7SL172P-201ENST00000460535 303 ntBASIC4.97□□□□□ -1.61
HNF4AP41235 AC091180.1-201ENST00000462104 372 ntBASIC4.97□□□□□ -1.61
HNF4AP41235 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC4.97□□□□□ -1.61
HNF4AP41235 NIFKP7-201ENST00000503365 834 ntBASIC4.97□□□□□ -1.61
HNF4AP41235 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.97□□□□□ -1.61
HNF4AP41235 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.97□□□□□ -1.61
HNF4AP41235 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.97□□□□□ -1.61
HNF4AP41235 RNA5SP92-201ENST00000516437 110 ntBASIC4.97□□□□□ -1.61
HNF4AP41235 AP006245.2-201ENST00000522004 300 ntBASIC4.97□□□□□ -1.61
HNF4AP41235 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.97□□□□□ -1.61
HNF4AP41235 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.97□□□□□ -1.61
HNF4AP41235 NOP56P3-201ENST00000549457 385 ntBASIC4.97□□□□□ -1.61
HNF4AP41235 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.97□□□□□ -1.61
HNF4AP41235 HNRNPCP4-201ENST00000571636 900 ntBASIC4.97□□□□□ -1.61
HNF4AP41235 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms