Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC073073.1-201ENST00000493920 463 ntBASIC5.64□□□□□ -1.51
CIITAP33076 RNA5SP392-201ENST00000516905 112 ntBASIC5.64□□□□□ -1.51
CIITAP33076 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC5.64□□□□□ -1.51
CIITAP33076 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.64□□□□□ -1.51
CIITAP33076 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.64□□□□□ -1.51
CIITAP33076 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.64□□□□□ -1.51
CIITAP33076 TVP23CP2-201ENST00000571473 623 ntBASIC5.64□□□□□ -1.51
CIITAP33076 FAM106CP-201ENST00000582212 507 ntBASIC5.64□□□□□ -1.51
CIITAP33076 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.64□□□□□ -1.51
CIITAP33076 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.64□□□□□ -1.51
CIITAP33076 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.64□□□□□ -1.51
CIITAP33076 CLIC4P2-201ENST00000601934 717 ntBASIC5.64□□□□□ -1.51
CIITAP33076 MTATP6P2-201ENST00000603319 678 ntBASIC5.64□□□□□ -1.51
CIITAP33076 AC074140.1-201ENST00000621617 208 ntBASIC5.64□□□□□ -1.51
CIITAP33076 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.64□□□□□ -1.51
CIITAP33076 AC097520.1-201ENST00000624435 385 ntBASIC5.64□□□□□ -1.51
CIITAP33076 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.64□□□□□ -1.51
CIITAP33076 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.64□□□□□ -1.51
CIITAP33076 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
CIITAP33076 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CIITAP33076 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CIITAP33076 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CIITAP33076 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CIITAP33076 AC002525.1-201ENST00000624392 1622 ntBASIC5.63□□□□□ -1.51
CIITAP33076 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.63□□□□□ -1.51
CIITAP33076 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CIITAP33076 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CIITAP33076 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CIITAP33076 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CIITAP33076 MIR550A3-201ENST00000390735 95 ntBASIC5.63□□□□□ -1.51
CIITAP33076 ATP5F1P6-201ENST00000402768 767 ntBASIC5.63□□□□□ -1.51
CIITAP33076 AL021331.1-201ENST00000402817 582 ntBASIC5.63□□□□□ -1.51
CIITAP33076 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.63□□□□□ -1.51
CIITAP33076 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.63□□□□□ -1.51
CIITAP33076 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC5.63□□□□□ -1.51
CIITAP33076 PA2G4P6-201ENST00000438325 1197 ntBASIC5.63□□□□□ -1.51
CIITAP33076 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CIITAP33076 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.63□□□□□ -1.51
CIITAP33076 RPS3AP53-201ENST00000454716 778 ntBASIC5.63□□□□□ -1.51
CIITAP33076 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.63□□□□□ -1.51
CIITAP33076 MTND2P6-201ENST00000455337 1030 ntBASIC5.63□□□□□ -1.51
CIITAP33076 RPL7P16-201ENST00000479738 738 ntBASIC5.63□□□□□ -1.51
CIITAP33076 RN7SL205P-201ENST00000490174 284 ntBASIC5.63□□□□□ -1.51
CIITAP33076 MYL12BP2-201ENST00000503948 512 ntBASIC5.63□□□□□ -1.51
CIITAP33076 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.63□□□□□ -1.51
CIITAP33076 NAMPTP2-201ENST00000505629 1115 ntBASIC5.63□□□□□ -1.51
CIITAP33076 GAPDHP56-201ENST00000506031 988 ntBASIC5.63□□□□□ -1.51
CIITAP33076 FABP5P6-201ENST00000510588 409 ntBASIC5.63□□□□□ -1.51
CIITAP33076 BTF3P13-201ENST00000513224 490 ntBASIC5.63□□□□□ -1.51
CIITAP33076 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.63□□□□□ -1.51
CIITAP33076 AP001922.4-201ENST00000526967 290 ntBASIC5.63□□□□□ -1.51
CIITAP33076 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CIITAP33076 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.63□□□□□ -1.51
CIITAP33076 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.63□□□□□ -1.51
CIITAP33076 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.63□□□□□ -1.51
CIITAP33076 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.63□□□□□ -1.51
CIITAP33076 AC091057.3-201ENST00000602684 733 ntBASIC5.63□□□□□ -1.51
CIITAP33076 AC245389.2-201ENST00000616023 576 ntBASIC5.63□□□□□ -1.51
CIITAP33076 AC242843.1-201ENST00000618702 573 ntBASIC5.63□□□□□ -1.51
CIITAP33076 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.63□□□□□ -1.51
CIITAP33076 AL353662.3-201ENST00000625131 237 ntBASIC5.63□□□□□ -1.51
CIITAP33076 FRG1EP-201ENST00000634469 770 ntBASIC5.63□□□□□ -1.51
CIITAP33076 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.63□□□□□ -1.51
CIITAP33076 AL645568.2-201ENST00000432815 1337 ntBASIC5.63□□□□□ -1.51
CIITAP33076 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
CIITAP33076 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.63□□□□□ -1.51
CIITAP33076 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
CIITAP33076 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.63□□□□□ -1.51
CIITAP33076 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
CIITAP33076 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.63□□□□□ -1.51
CIITAP33076 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.63□□□□□ -1.51
CIITAP33076 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CIITAP33076 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CIITAP33076 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
CIITAP33076 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CIITAP33076 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CIITAP33076 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
CIITAP33076 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CIITAP33076 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CIITAP33076 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.62□□□□□ -1.51
CIITAP33076 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CIITAP33076 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CIITAP33076 SPATA2P1-201ENST00000431223 2055 ntBASIC5.62□□□□□ -1.51
CIITAP33076 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CIITAP33076 AC010266.2-201ENST00000564741 3255 ntBASIC5.62□□□□□ -1.51
CIITAP33076 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CIITAP33076 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CIITAP33076 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.62□□□□□ -1.51
CIITAP33076 RNU6-1257P-201ENST00000384625 110 ntBASIC5.62□□□□□ -1.51
CIITAP33076 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CIITAP33076 AC002524.1-201ENST00000411687 547 ntBASIC5.62□□□□□ -1.51
CIITAP33076 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.62□□□□□ -1.51
CIITAP33076 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.62□□□□□ -1.51
CIITAP33076 RPS26P4-201ENST00000431743 355 ntBASIC5.62□□□□□ -1.51
CIITAP33076 AC093414.1-201ENST00000434712 514 ntBASIC5.62□□□□□ -1.51
CIITAP33076 Z80107.1-201ENST00000436830 412 ntBASIC5.62□□□□□ -1.51
CIITAP33076 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC5.62□□□□□ -1.51
CIITAP33076 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.62□□□□□ -1.51
CIITAP33076 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.62□□□□□ -1.51
CIITAP33076 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms