Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AP000648.2-201ENST00000624182 404 ntBASIC5.31□□□□□ -1.56
COL4A5P29400 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
COL4A5P29400 BCORP1-203ENST00000513194 5093 ntBASIC5.3□□□□□ -1.56
COL4A5P29400 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL4A5P29400 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL4A5P29400 AL627171.1-201ENST00000618845 1308 ntBASIC5.3□□□□□ -1.56
COL4A5P29400 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC5.3□□□□□ -1.56
COL4A5P29400 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL4A5P29400 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.3□□□□□ -1.56
COL4A5P29400 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL4A5P29400 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL4A5P29400 SNORA63.1-201ENST00000362493 131 ntBASIC5.3□□□□□ -1.56
COL4A5P29400 RNU1-14P-201ENST00000362759 152 ntBASIC5.3□□□□□ -1.56
COL4A5P29400 RNA5SP513-201ENST00000364648 118 ntBASIC5.3□□□□□ -1.56
COL4A5P29400 RNA5SP151-201ENST00000365632 117 ntBASIC5.3□□□□□ -1.56
COL4A5P29400 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL4A5P29400 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
COL4A5P29400 MT-RNR1-201ENST00000389680 954 ntBASIC5.3□□□□□ -1.56
COL4A5P29400 RNA5SP36-201ENST00000410197 133 ntBASIC5.3□□□□□ -1.56
COL4A5P29400 AC069157.1-201ENST00000421749 137 ntBASIC5.3□□□□□ -1.56
COL4A5P29400 GOT2P5-201ENST00000433995 546 ntBASIC5.3□□□□□ -1.56
COL4A5P29400 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
COL4A5P29400 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC5.3□□□□□ -1.56
COL4A5P29400 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.3□□□□□ -1.56
COL4A5P29400 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.3□□□□□ -1.56
COL4A5P29400 AC012671.1-201ENST00000451912 203 ntBASIC5.3□□□□□ -1.56
COL4A5P29400 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.3□□□□□ -1.56
COL4A5P29400 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.3□□□□□ -1.56
COL4A5P29400 AP000889.1-201ENST00000530968 660 ntBASIC5.3□□□□□ -1.56
COL4A5P29400 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.3□□□□□ -1.56
COL4A5P29400 AC006349.1-201ENST00000555526 235 ntBASIC5.3□□□□□ -1.56
COL4A5P29400 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.3□□□□□ -1.56
COL4A5P29400 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.3□□□□□ -1.56
COL4A5P29400 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL4A5P29400 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
COL4A5P29400 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
COL4A5P29400 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL4A5P29400 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.3□□□□□ -1.56
COL4A5P29400 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL4A5P29400 AC139769.1-204ENST00000472297 1931 ntBASIC5.29□□□□□ -1.56
COL4A5P29400 AL136164.3-201ENST00000624429 3978 ntBASIC5.29□□□□□ -1.56
COL4A5P29400 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL4A5P29400 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
COL4A5P29400 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
COL4A5P29400 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL4A5P29400 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL4A5P29400 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL4A5P29400 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC5.29□□□□□ -1.56
COL4A5P29400 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
COL4A5P29400 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL4A5P29400 AC079809.1-201ENST00000415468 276 ntBASIC5.29□□□□□ -1.56
COL4A5P29400 RPEP2-201ENST00000432149 701 ntBASIC5.29□□□□□ -1.56
COL4A5P29400 UBE2V1P3-201ENST00000439651 417 ntBASIC5.29□□□□□ -1.56
COL4A5P29400 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.29□□□□□ -1.56
COL4A5P29400 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.29□□□□□ -1.56
COL4A5P29400 AC104651.2-201ENST00000447549 528 ntBASIC5.29□□□□□ -1.56
COL4A5P29400 AL133547.1-201ENST00000448546 220 ntBASIC5.29□□□□□ -1.56
COL4A5P29400 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.29□□□□□ -1.56
COL4A5P29400 AC090686.1-201ENST00000481577 749 ntBASIC5.29□□□□□ -1.56
COL4A5P29400 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL4A5P29400 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.29□□□□□ -1.56
COL4A5P29400 RNU4-89P-201ENST00000607443 133 ntBASIC5.29□□□□□ -1.56
COL4A5P29400 MAPK10-328ENST00000641553 4009 ntBASIC5.29□□□□□ -1.56
COL4A5P29400 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.29□□□□□ -1.56
COL4A5P29400 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL4A5P29400 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.29□□□□□ -1.56
COL4A5P29400 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL4A5P29400 ADAM24P-201ENST00000398655 2101 ntBASIC5.29□□□□□ -1.56
COL4A5P29400 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL4A5P29400 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
COL4A5P29400 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
COL4A5P29400 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
COL4A5P29400 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.29□□□□□ -1.56
COL4A5P29400 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL4A5P29400 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
COL4A5P29400 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL4A5P29400 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.28□□□□□ -1.56
COL4A5P29400 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
COL4A5P29400 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
COL4A5P29400 PCNPP4-201ENST00000414817 517 ntBASIC5.28□□□□□ -1.56
COL4A5P29400 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.28□□□□□ -1.56
COL4A5P29400 CYCSP24-201ENST00000445119 316 ntBASIC5.28□□□□□ -1.56
COL4A5P29400 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL4A5P29400 AC069200.1-201ENST00000609511 323 ntBASIC5.28□□□□□ -1.56
COL4A5P29400 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.28□□□□□ -1.56
COL4A5P29400 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.28□□□□□ -1.56
COL4A5P29400 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
COL4A5P29400 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
COL4A5P29400 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL4A5P29400 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL4A5P29400 AC007159.1-201ENST00000566529 4706 ntBASIC5.28□□□□□ -1.56
COL4A5P29400 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL4A5P29400 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL4A5P29400 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.28□□□□□ -1.56
COL4A5P29400 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
COL4A5P29400 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL4A5P29400 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.28□□□□□ -1.56
COL4A5P29400 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.28□□□□□ -1.56
COL4A5P29400 AC073342.2-201ENST00000595842 1800 ntBASIC5.28□□□□□ -1.56
COL4A5P29400 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms