Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DMBP28068 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DMBP28068 BCLAF1P2-201ENST00000624956 2609 ntBASIC3.62□□□□□ -1.83
HLA-DMBP28068 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC3.62□□□□□ -1.83
HLA-DMBP28068 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC3.62□□□□□ -1.83
HLA-DMBP28068 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DMBP28068 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC3.62□□□□□ -1.83
HLA-DMBP28068 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DMBP28068 AC099654.2-201ENST00000433031 1980 ntBASIC3.62□□□□□ -1.83
HLA-DMBP28068 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
HLA-DMBP28068 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HLA-DMBP28068 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.61□□□□□ -1.83
HLA-DMBP28068 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC3.61□□□□□ -1.83
HLA-DMBP28068 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.61□□□□□ -1.83
HLA-DMBP28068 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HLA-DMBP28068 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.61□□□□□ -1.83
HLA-DMBP28068 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
HLA-DMBP28068 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HLA-DMBP28068 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
HLA-DMBP28068 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HLA-DMBP28068 RNU1-82P-201ENST00000390851 165 ntBASIC3.61□□□□□ -1.83
HLA-DMBP28068 AL121834.1-202ENST00000404494 277 ntBASIC3.61□□□□□ -1.83
HLA-DMBP28068 AP002530.1-201ENST00000405705 684 ntBASIC3.61□□□□□ -1.83
HLA-DMBP28068 RPL37P18-201ENST00000411602 243 ntBASIC3.61□□□□□ -1.83
HLA-DMBP28068 CHEK2P3-201ENST00000416118 248 ntBASIC3.61□□□□□ -1.83
HLA-DMBP28068 AC013470.3-201ENST00000420252 1194 ntBASIC3.61□□□□□ -1.83
HLA-DMBP28068 AC106901.1-201ENST00000425086 698 ntBASIC3.61□□□□□ -1.83
HLA-DMBP28068 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC3.61□□□□□ -1.83
HLA-DMBP28068 AC104837.2-201ENST00000427236 424 ntBASIC3.61□□□□□ -1.83
HLA-DMBP28068 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC3.61□□□□□ -1.83
HLA-DMBP28068 RPL31P44-201ENST00000447680 377 ntBASIC3.61□□□□□ -1.83
HLA-DMBP28068 RPS3AP53-201ENST00000454716 778 ntBASIC3.61□□□□□ -1.83
HLA-DMBP28068 EIF2S2P5-201ENST00000457635 968 ntBASIC3.61□□□□□ -1.83
HLA-DMBP28068 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC3.61□□□□□ -1.83
HLA-DMBP28068 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC3.61□□□□□ -1.83
HLA-DMBP28068 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC3.61□□□□□ -1.83
HLA-DMBP28068 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC3.61□□□□□ -1.83
HLA-DMBP28068 RGS5-219ENST00000528019 512 ntTSL 4 BASIC3.61□□□□□ -1.83
HLA-DMBP28068 AC107918.3-201ENST00000533272 382 ntBASIC3.61□□□□□ -1.83
HLA-DMBP28068 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HLA-DMBP28068 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC3.61□□□□□ -1.83
HLA-DMBP28068 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC3.61□□□□□ -1.83
HLA-DMBP28068 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
HLA-DMBP28068 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC3.61□□□□□ -1.83
HLA-DMBP28068 MIR4480-201ENST00000582492 71 ntBASIC3.61□□□□□ -1.83
HLA-DMBP28068 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC3.61□□□□□ -1.83
HLA-DMBP28068 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HLA-DMBP28068 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC3.61□□□□□ -1.83
HLA-DMBP28068 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.61□□□□□ -1.83
HLA-DMBP28068 AL159169.2-201ENST00000610061 1269 ntBASIC3.61□□□□□ -1.83
HLA-DMBP28068 AL136295.6-201ENST00000610486 658 ntBASIC3.61□□□□□ -1.83
HLA-DMBP28068 AC009237.17-201ENST00000618111 748 ntBASIC3.61□□□□□ -1.83
HLA-DMBP28068 AC073342.3-201ENST00000624211 193 ntBASIC3.61□□□□□ -1.83
HLA-DMBP28068 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC3.61□□□□□ -1.83
HLA-DMBP28068 AC006453.5-201ENST00000636451 619 ntBASIC3.61□□□□□ -1.83
HLA-DMBP28068 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
HLA-DMBP28068 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HLA-DMBP28068 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.61□□□□□ -1.83
HLA-DMBP28068 AL136164.3-201ENST00000624429 3978 ntBASIC3.61□□□□□ -1.83
HLA-DMBP28068 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
HLA-DMBP28068 AC107021.2-201ENST00000567714 2095 ntBASIC3.61□□□□□ -1.83
HLA-DMBP28068 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
HLA-DMBP28068 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HLA-DMBP28068 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HLA-DMBP28068 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.61□□□□□ -1.83
HLA-DMBP28068 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DMBP28068 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DMBP28068 DLD-204ENST00000437604 1859 ntTSL 2 BASIC3.6□□□□□ -1.83
HLA-DMBP28068 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DMBP28068 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.6□□□□□ -1.83
HLA-DMBP28068 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC3.6□□□□□ -1.83
HLA-DMBP28068 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DMBP28068 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DMBP28068 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
HLA-DMBP28068 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DMBP28068 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC3.6□□□□□ -1.83
HLA-DMBP28068 AL512430.2-201ENST00000406786 339 ntBASIC3.6□□□□□ -1.83
HLA-DMBP28068 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC3.6□□□□□ -1.83
HLA-DMBP28068 RBMY2KP-201ENST00000418221 992 ntBASIC3.6□□□□□ -1.83
HLA-DMBP28068 OR2AM1P-201ENST00000422137 422 ntBASIC3.6□□□□□ -1.83
HLA-DMBP28068 RPL7P57-201ENST00000423238 740 ntBASIC3.6□□□□□ -1.83
HLA-DMBP28068 RPS12P5-201ENST00000423449 371 ntBASIC3.6□□□□□ -1.83
HLA-DMBP28068 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC3.6□□□□□ -1.83
HLA-DMBP28068 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC3.6□□□□□ -1.83
HLA-DMBP28068 RPL7P11-201ENST00000437586 658 ntBASIC3.6□□□□□ -1.83
HLA-DMBP28068 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC3.6□□□□□ -1.83
HLA-DMBP28068 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DMBP28068 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC3.6□□□□□ -1.83
HLA-DMBP28068 NPM1P39-201ENST00000449818 867 ntBASIC3.6□□□□□ -1.83
HLA-DMBP28068 AC234781.3-201ENST00000452540 973 ntBASIC3.6□□□□□ -1.83
HLA-DMBP28068 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC3.6□□□□□ -1.83
HLA-DMBP28068 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC3.6□□□□□ -1.83
HLA-DMBP28068 AC107015.1-201ENST00000466902 747 ntBASIC3.6□□□□□ -1.83
HLA-DMBP28068 RPL7P16-201ENST00000479738 738 ntBASIC3.6□□□□□ -1.83
HLA-DMBP28068 AC090142.2-201ENST00000483263 416 ntBASIC3.6□□□□□ -1.83
HLA-DMBP28068 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DMBP28068 AC021146.3-201ENST00000511911 260 ntBASIC3.6□□□□□ -1.83
HLA-DMBP28068 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.6□□□□□ -1.83
HLA-DMBP28068 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC3.6□□□□□ -1.83
HLA-DMBP28068 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms