Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DMAP28067 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DMAP28067 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DMAP28067 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DMAP28067 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.1□□□□□ -1.75
HLA-DMAP28067 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DMAP28067 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DMAP28067 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DMAP28067 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DMAP28067 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DMAP28067 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
HLA-DMAP28067 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.09□□□□□ -1.75
HLA-DMAP28067 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HLA-DMAP28067 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HLA-DMAP28067 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
HLA-DMAP28067 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DMAP28067 RNA5SP22-201ENST00000365393 109 ntBASIC4.09□□□□□ -1.75
HLA-DMAP28067 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DMAP28067 SEC63P1-201ENST00000425785 1258 ntBASIC4.09□□□□□ -1.75
HLA-DMAP28067 AC092013.1-201ENST00000438795 332 ntBASIC4.09□□□□□ -1.75
HLA-DMAP28067 SYT14P1-201ENST00000481459 721 ntBASIC4.09□□□□□ -1.75
HLA-DMAP28067 AC090013.1-201ENST00000485147 480 ntBASIC4.09□□□□□ -1.75
HLA-DMAP28067 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
HLA-DMAP28067 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.09□□□□□ -1.75
HLA-DMAP28067 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DMAP28067 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.09□□□□□ -1.75
HLA-DMAP28067 OR5M7P-201ENST00000526140 972 ntBASIC4.09□□□□□ -1.75
HLA-DMAP28067 AC027544.3-201ENST00000535082 757 ntBASIC4.09□□□□□ -1.75
HLA-DMAP28067 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.09□□□□□ -1.75
HLA-DMAP28067 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DMAP28067 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DMAP28067 AC017076.1-201ENST00000607613 578 ntBASIC4.09□□□□□ -1.75
HLA-DMAP28067 MIR7109-201ENST00000613748 65 ntBASIC4.09□□□□□ -1.75
HLA-DMAP28067 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.09□□□□□ -1.75
HLA-DMAP28067 AC005840.5-201ENST00000619166 599 ntBASIC4.09□□□□□ -1.75
HLA-DMAP28067 AC048341.3-201ENST00000619323 491 ntBASIC4.09□□□□□ -1.75
HLA-DMAP28067 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DMAP28067 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.09□□□□□ -1.75
HLA-DMAP28067 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DMAP28067 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DMAP28067 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
HLA-DMAP28067 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DMAP28067 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
HLA-DMAP28067 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
HLA-DMAP28067 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
HLA-DMAP28067 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
HLA-DMAP28067 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
HLA-DMAP28067 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.09□□□□□ -1.76
HLA-DMAP28067 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.76
HLA-DMAP28067 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
HLA-DMAP28067 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
HLA-DMAP28067 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.09□□□□□ -1.76
HLA-DMAP28067 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HLA-DMAP28067 AC016588.2-201ENST00000632484 3021 ntBASIC4.08□□□□□ -1.76
HLA-DMAP28067 AL356489.2-201ENST00000566968 3528 ntBASIC4.08□□□□□ -1.76
HLA-DMAP28067 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DMAP28067 MAPK10-253ENST00000641010 4072 ntBASIC4.08□□□□□ -1.76
HLA-DMAP28067 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DMAP28067 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DMAP28067 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
HLA-DMAP28067 AC067945.1-201ENST00000342609 618 ntBASIC4.08□□□□□ -1.76
HLA-DMAP28067 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DMAP28067 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DMAP28067 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HLA-DMAP28067 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DMAP28067 AL357515.1-201ENST00000402967 542 ntBASIC4.08□□□□□ -1.76
HLA-DMAP28067 AL136116.2-201ENST00000404020 785 ntBASIC4.08□□□□□ -1.76
HLA-DMAP28067 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.08□□□□□ -1.76
HLA-DMAP28067 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DMAP28067 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.08□□□□□ -1.76
HLA-DMAP28067 AL391219.1-201ENST00000422570 483 ntBASIC4.08□□□□□ -1.76
HLA-DMAP28067 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
HLA-DMAP28067 MTND2P11-201ENST00000423638 648 ntBASIC4.08□□□□□ -1.76
HLA-DMAP28067 AC108075.1-201ENST00000424692 529 ntBASIC4.08□□□□□ -1.76
HLA-DMAP28067 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.08□□□□□ -1.76
HLA-DMAP28067 RPL23AP4-201ENST00000427757 463 ntBASIC4.08□□□□□ -1.76
HLA-DMAP28067 ELOCP18-201ENST00000434209 337 ntBASIC4.08□□□□□ -1.76
HLA-DMAP28067 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DMAP28067 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.08□□□□□ -1.76
HLA-DMAP28067 AC007386.1-201ENST00000455212 582 ntBASIC4.08□□□□□ -1.76
HLA-DMAP28067 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DMAP28067 PPIAP21-201ENST00000464473 501 ntBASIC4.08□□□□□ -1.76
HLA-DMAP28067 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DMAP28067 AC083829.1-201ENST00000503756 657 ntBASIC4.08□□□□□ -1.76
HLA-DMAP28067 AC008758.3-201ENST00000507003 1829 ntBASIC4.08□□□□□ -1.76
HLA-DMAP28067 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DMAP28067 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DMAP28067 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.08□□□□□ -1.76
HLA-DMAP28067 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.08□□□□□ -1.76
HLA-DMAP28067 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DMAP28067 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DMAP28067 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DMAP28067 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.08□□□□□ -1.76
HLA-DMAP28067 AC084757.1-201ENST00000559987 490 ntBASIC4.08□□□□□ -1.76
HLA-DMAP28067 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC4.08□□□□□ -1.76
HLA-DMAP28067 AC011487.3-201ENST00000593607 453 ntBASIC4.08□□□□□ -1.76
HLA-DMAP28067 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DMAP28067 AC027243.2-201ENST00000602530 724 ntBASIC4.08□□□□□ -1.76
HLA-DMAP28067 AC105254.2-201ENST00000603636 436 ntBASIC4.08□□□□□ -1.76
HLA-DMAP28067 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms