Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
COL8A2P25067 HMGB3P16-201ENST00000508037 287 ntBASIC3.92□□□□□ -1.78
COL8A2P25067 AC007016.1-201ENST00000512110 244 ntBASIC3.92□□□□□ -1.78
COL8A2P25067 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC3.92□□□□□ -1.78
COL8A2P25067 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC3.92□□□□□ -1.78
COL8A2P25067 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
COL8A2P25067 AC105129.1-201ENST00000560250 297 ntBASIC3.92□□□□□ -1.78
COL8A2P25067 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC3.92□□□□□ -1.78
COL8A2P25067 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC3.92□□□□□ -1.78
COL8A2P25067 RN7SL435P-201ENST00000584418 282 ntBASIC3.92□□□□□ -1.78
COL8A2P25067 AC107993.1-201ENST00000591343 684 ntBASIC3.92□□□□□ -1.78
COL8A2P25067 RPL12P25-202ENST00000598100 674 ntBASIC3.92□□□□□ -1.78
COL8A2P25067 AL133338.2-201ENST00000604292 736 ntBASIC3.92□□□□□ -1.78
COL8A2P25067 AC100847.1-201ENST00000611316 481 ntBASIC3.92□□□□□ -1.78
COL8A2P25067 AC015804.1-201ENST00000622935 435 ntBASIC3.92□□□□□ -1.78
COL8A2P25067 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC3.92□□□□□ -1.78
COL8A2P25067 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL8A2P25067 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
COL8A2P25067 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
COL8A2P25067 AL034370.1-201ENST00000397254 1590 ntBASIC3.92□□□□□ -1.78
COL8A2P25067 AL445487.1-201ENST00000415694 1580 ntBASIC3.92□□□□□ -1.78
COL8A2P25067 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL8A2P25067 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
COL8A2P25067 AC107068.1-201ENST00000563286 4218 ntBASIC3.92□□□□□ -1.78
COL8A2P25067 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
COL8A2P25067 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.92□□□□□ -1.78
COL8A2P25067 AL137100.1-201ENST00000556703 1620 ntBASIC3.92□□□□□ -1.78
COL8A2P25067 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL8A2P25067 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL8A2P25067 AL121950.1-201ENST00000624993 2077 ntBASIC3.91□□□□□ -1.78
COL8A2P25067 ICE2P1-201ENST00000512800 1849 ntBASIC3.91□□□□□ -1.78
COL8A2P25067 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL8A2P25067 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
COL8A2P25067 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL8A2P25067 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL8A2P25067 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL8A2P25067 AC008549.2-201ENST00000333482 706 ntBASIC3.91□□□□□ -1.78
COL8A2P25067 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL8A2P25067 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL8A2P25067 IGKV7-3-201ENST00000357453 298 ntBASIC3.91□□□□□ -1.78
COL8A2P25067 RNU6-673P-201ENST00000365084 104 ntBASIC3.91□□□□□ -1.78
COL8A2P25067 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC3.91□□□□□ -1.78
COL8A2P25067 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC3.91□□□□□ -1.78
COL8A2P25067 Z98745.1-201ENST00000402553 494 ntBASIC3.91□□□□□ -1.78
COL8A2P25067 VN1R37P-201ENST00000419096 748 ntBASIC3.91□□□□□ -1.78
COL8A2P25067 UQCRBP1-201ENST00000421129 336 ntBASIC3.91□□□□□ -1.78
COL8A2P25067 RPL36AP10-201ENST00000421785 322 ntBASIC3.91□□□□□ -1.78
COL8A2P25067 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.91□□□□□ -1.78
COL8A2P25067 C4BPAP2-201ENST00000428434 478 ntBASIC3.91□□□□□ -1.78
COL8A2P25067 RPL12P28-201ENST00000430852 489 ntBASIC3.91□□□□□ -1.78
COL8A2P25067 NPM1P33-201ENST00000438918 872 ntBASIC3.91□□□□□ -1.78
COL8A2P25067 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.91□□□□□ -1.78
COL8A2P25067 AL162591.2-201ENST00000449634 317 ntBASIC3.91□□□□□ -1.78
COL8A2P25067 RNA5SP103-201ENST00000459503 118 ntBASIC3.91□□□□□ -1.78
COL8A2P25067 CREM-220ENST00000463314 964 ntTSL 2 BASIC3.91□□□□□ -1.78
COL8A2P25067 AC092905.1-201ENST00000467527 949 ntBASIC3.91□□□□□ -1.78
COL8A2P25067 AC013356.1-201ENST00000489027 564 ntBASIC3.91□□□□□ -1.78
COL8A2P25067 RPL36AP41-201ENST00000493820 306 ntBASIC3.91□□□□□ -1.78
COL8A2P25067 KATNBL1P4-201ENST00000503545 918 ntBASIC3.91□□□□□ -1.78
COL8A2P25067 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.91□□□□□ -1.78
COL8A2P25067 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC3.91□□□□□ -1.78
COL8A2P25067 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
COL8A2P25067 AC084783.1-201ENST00000565846 910 ntBASIC3.91□□□□□ -1.78
COL8A2P25067 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL8A2P25067 MIR4277-201ENST00000578298 84 ntBASIC3.91□□□□□ -1.78
COL8A2P25067 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.91□□□□□ -1.78
COL8A2P25067 MIR5096-201ENST00000583713 70 ntBASIC3.91□□□□□ -1.78
COL8A2P25067 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC3.91□□□□□ -1.78
COL8A2P25067 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC3.91□□□□□ -1.78
COL8A2P25067 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.91□□□□□ -1.78
COL8A2P25067 MIR6758-201ENST00000620653 63 ntBASIC3.91□□□□□ -1.78
COL8A2P25067 AC002044.3-201ENST00000623314 541 ntBASIC3.91□□□□□ -1.78
COL8A2P25067 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL8A2P25067 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL8A2P25067 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC3.91□□□□□ -1.78
COL8A2P25067 OR14L1P-202ENST00000641545 3009 ntBASIC3.91□□□□□ -1.78
COL8A2P25067 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL8A2P25067 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC3.91□□□□□ -1.78
COL8A2P25067 AL592148.3-201ENST00000608771 2646 ntBASIC3.91□□□□□ -1.78
COL8A2P25067 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL8A2P25067 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
COL8A2P25067 AC120338.1-201ENST00000625074 1541 ntBASIC3.9□□□□□ -1.78
COL8A2P25067 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.9□□□□□ -1.78
COL8A2P25067 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
COL8A2P25067 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC3.9□□□□□ -1.78
COL8A2P25067 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC3.9□□□□□ -1.78
COL8A2P25067 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC3.9□□□□□ -1.78
COL8A2P25067 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC3.9□□□□□ -1.78
COL8A2P25067 AC021146.4-201ENST00000309229 279 ntBASIC3.9□□□□□ -1.79
COL8A2P25067 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
COL8A2P25067 RNA5SP447-201ENST00000363749 119 ntBASIC3.9□□□□□ -1.79
COL8A2P25067 SNORA71.2-201ENST00000364941 134 ntBASIC3.9□□□□□ -1.79
COL8A2P25067 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
COL8A2P25067 MIR129-1-201ENST00000384972 72 ntBASIC3.9□□□□□ -1.79
COL8A2P25067 MIR1271-201ENST00000408537 86 ntBASIC3.9□□□□□ -1.79
COL8A2P25067 P2RY10P2-201ENST00000416730 913 ntBASIC3.9□□□□□ -1.79
COL8A2P25067 COX6CP17-201ENST00000421389 185 ntBASIC3.9□□□□□ -1.79
COL8A2P25067 RPL7P57-201ENST00000423238 740 ntBASIC3.9□□□□□ -1.79
COL8A2P25067 AC092447.2-201ENST00000435487 669 ntBASIC3.9□□□□□ -1.79
COL8A2P25067 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms