Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 MED14P1-201ENST00000430517 648 ntBASIC7.12□□□□□ -1.27
ERCC3P19447 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC7.12□□□□□ -1.27
ERCC3P19447 TAF9P1-201ENST00000445421 515 ntBASIC7.12□□□□□ -1.27
ERCC3P19447 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC7.12□□□□□ -1.27
ERCC3P19447 AC005077.1-201ENST00000449226 375 ntBASIC7.12□□□□□ -1.27
ERCC3P19447 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC7.12□□□□□ -1.27
ERCC3P19447 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC7.12□□□□□ -1.27
ERCC3P19447 AL354710.1-201ENST00000453641 246 ntBASIC7.12□□□□□ -1.27
ERCC3P19447 TAF9P2-201ENST00000454958 515 ntBASIC7.12□□□□□ -1.27
ERCC3P19447 MTCO3P11-201ENST00000455103 774 ntBASIC7.12□□□□□ -1.27
ERCC3P19447 AC011476.1-201ENST00000466725 307 ntBASIC7.12□□□□□ -1.27
ERCC3P19447 RN7SL193P-201ENST00000491708 276 ntBASIC7.12□□□□□ -1.27
ERCC3P19447 MTCO3P7-201ENST00000510008 774 ntBASIC7.12□□□□□ -1.27
ERCC3P19447 MTND3P5-201ENST00000512798 333 ntBASIC7.12□□□□□ -1.27
ERCC3P19447 RN7SKP67-201ENST00000515905 235 ntBASIC7.12□□□□□ -1.27
ERCC3P19447 Y_RNA.695-201ENST00000516715 107 ntBASIC7.12□□□□□ -1.27
ERCC3P19447 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC7.12□□□□□ -1.27
ERCC3P19447 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC7.12□□□□□ -1.27
ERCC3P19447 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
ERCC3P19447 AC068714.1-201ENST00000559623 800 ntBASIC7.12□□□□□ -1.27
ERCC3P19447 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC7.12□□□□□ -1.27
ERCC3P19447 AL512347.1-201ENST00000566420 503 ntBASIC7.12□□□□□ -1.27
ERCC3P19447 AC092121.1-201ENST00000569452 202 ntBASIC7.12□□□□□ -1.27
ERCC3P19447 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC7.12□□□□□ -1.27
ERCC3P19447 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC7.12□□□□□ -1.27
ERCC3P19447 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC7.12□□□□□ -1.27
ERCC3P19447 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
ERCC3P19447 U73023.1-201ENST00000603134 700 ntBASIC7.12□□□□□ -1.27
ERCC3P19447 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC7.12□□□□□ -1.27
ERCC3P19447 AC013562.2-201ENST00000611632 603 ntBASIC7.12□□□□□ -1.27
ERCC3P19447 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC7.12□□□□□ -1.27
ERCC3P19447 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC7.12□□□□□ -1.27
ERCC3P19447 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
ERCC3P19447 AC068769.1-201ENST00000474767 2426 ntBASIC7.12□□□□□ -1.27
ERCC3P19447 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC7.12□□□□□ -1.27
ERCC3P19447 AC022325.1-201ENST00000502748 2199 ntBASIC7.12□□□□□ -1.27
ERCC3P19447 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
ERCC3P19447 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
ERCC3P19447 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
ERCC3P19447 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC7.11□□□□□ -1.27
ERCC3P19447 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC7.11□□□□□ -1.27
ERCC3P19447 AFP-201ENST00000226359 1914 ntTSL 5 BASIC7.11□□□□□ -1.27
ERCC3P19447 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
ERCC3P19447 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC7.11□□□□□ -1.27
ERCC3P19447 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
ERCC3P19447 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
ERCC3P19447 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
ERCC3P19447 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
ERCC3P19447 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
ERCC3P19447 OR52B3P-201ENST00000314715 928 ntBASIC7.11□□□□□ -1.27
ERCC3P19447 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
ERCC3P19447 Y_RNA.194-201ENST00000363985 102 ntBASIC7.11□□□□□ -1.27
ERCC3P19447 CGA-201ENST00000369582 729 ntTSL 5 BASIC7.11□□□□□ -1.27
ERCC3P19447 AL139098.1-201ENST00000407291 389 ntBASIC7.11□□□□□ -1.27
ERCC3P19447 AC002524.1-201ENST00000411687 547 ntBASIC7.11□□□□□ -1.27
ERCC3P19447 AL031779.1-201ENST00000415663 330 ntBASIC7.11□□□□□ -1.27
ERCC3P19447 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC7.11□□□□□ -1.27
ERCC3P19447 RPL35AP31-201ENST00000418340 337 ntBASIC7.11□□□□□ -1.27
ERCC3P19447 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.11□□□□□ -1.27
ERCC3P19447 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC7.11□□□□□ -1.27
ERCC3P19447 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC7.11□□□□□ -1.27
ERCC3P19447 AL138878.2-201ENST00000440581 1241 ntBASIC7.11□□□□□ -1.27
ERCC3P19447 MTND1P30-201ENST00000441241 901 ntBASIC7.11□□□□□ -1.27
ERCC3P19447 AL161636.2-201ENST00000445179 927 ntBASIC7.11□□□□□ -1.27
ERCC3P19447 RPS27AP15-201ENST00000447672 466 ntBASIC7.11□□□□□ -1.27
ERCC3P19447 MTND2P19-201ENST00000449129 1012 ntBASIC7.11□□□□□ -1.27
ERCC3P19447 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.11□□□□□ -1.27
ERCC3P19447 RN7SL273P-201ENST00000481561 299 ntBASIC7.11□□□□□ -1.27
ERCC3P19447 AC069304.1-201ENST00000491593 704 ntBASIC7.11□□□□□ -1.27
ERCC3P19447 AC005912.1-201ENST00000495392 255 ntBASIC7.11□□□□□ -1.27
ERCC3P19447 LAMTOR3P2-201ENST00000504479 232 ntBASIC7.11□□□□□ -1.27
ERCC3P19447 AC010424.1-201ENST00000506336 297 ntBASIC7.11□□□□□ -1.27
ERCC3P19447 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC7.11□□□□□ -1.27
ERCC3P19447 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
ERCC3P19447 BICD1-206ENST00000551086 423 ntTSL 3 BASIC7.11□□□□□ -1.27
ERCC3P19447 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC7.11□□□□□ -1.27
ERCC3P19447 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC7.11□□□□□ -1.27
ERCC3P19447 AC018552.1-201ENST00000562099 811 ntBASIC7.11□□□□□ -1.27
ERCC3P19447 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC7.11□□□□□ -1.27
ERCC3P19447 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC7.11□□□□□ -1.27
ERCC3P19447 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC7.11□□□□□ -1.27
ERCC3P19447 WISP1-OT1-201ENST00000602893 642 ntBASIC7.11□□□□□ -1.27
ERCC3P19447 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC7.11□□□□□ -1.27
ERCC3P19447 AC245297.2-201ENST00000610119 565 ntBASIC7.11□□□□□ -1.27
ERCC3P19447 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC7.11□□□□□ -1.27
ERCC3P19447 AL136228.1-201ENST00000622221 319 ntBASIC7.11□□□□□ -1.27
ERCC3P19447 AC127502.3-201ENST00000636170 1206 ntBASIC7.11□□□□□ -1.27
ERCC3P19447 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC7.11□□□□□ -1.27
ERCC3P19447 5S_rRNA.28-201ENST00000638107 119 ntBASIC7.11□□□□□ -1.27
ERCC3P19447 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
ERCC3P19447 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
ERCC3P19447 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
ERCC3P19447 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
ERCC3P19447 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
ERCC3P19447 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
ERCC3P19447 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
ERCC3P19447 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
ERCC3P19447 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
ERCC3P19447 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
ERCC3P19447 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms