Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 OR1L6-202ENST00000373684 1044 ntBASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 AP002530.1-201ENST00000405705 684 ntBASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 AC002524.1-201ENST00000411687 547 ntBASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 XKRYP4-201ENST00000414395 483 ntBASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 PCNPP4-201ENST00000414817 517 ntBASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 PRPF38AP2-201ENST00000438179 851 ntBASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 ZNF736P1Y-201ENST00000440402 1276 ntBASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 RNFT1P2-201ENST00000443064 757 ntBASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 XKRYP5-201ENST00000449659 483 ntBASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 AC022431.1-201ENST00000450941 438 ntBASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 RPL7P41-201ENST00000485823 957 ntBASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 IGBP1P4-201ENST00000503202 879 ntBASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 MTCO2P9-201ENST00000503214 694 ntBASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 RPS27AP18-201ENST00000515536 459 ntBASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 RNU6-1004P-201ENST00000516584 111 ntBASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 AC020937.1-201ENST00000519677 1013 ntBASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 UBTFL9-201ENST00000534504 1148 ntBASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 NMNAT1P1-201ENST00000554095 876 ntBASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 AC005034.4-201ENST00000603612 899 ntBASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 AC079880.2-201ENST00000603790 1213 ntBASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 AL136370.1-201ENST00000608166 691 ntBASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 AC011472.4-201ENST00000615848 491 ntBASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 AP003400.6-201ENST00000624698 740 ntBASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 ADAM5-202ENST00000399789 1942 ntBASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.83□□□□□ -1.64
RAB40ALP0C0E4 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 TRIM51GP-201ENST00000534741 1350 ntBASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 AC073136.1-201ENST00000449426 2884 ntBASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 RN7SKP95-201ENST00000362860 303 ntBASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 RNU6-252P-201ENST00000363232 107 ntBASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 RN7SKP113-201ENST00000363891 295 ntBASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 RNA5SP87-201ENST00000384155 118 ntBASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 RNU4-31P-201ENST00000384211 141 ntBASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 MIR589-201ENST00000385238 99 ntBASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 RPS27AP11-201ENST00000402798 447 ntBASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 CHEK2P3-201ENST00000416118 248 ntBASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 USP9YP9-201ENST00000429406 715 ntBASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 RPL19P16-201ENST00000433839 588 ntBASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 AC090018.1-201ENST00000434369 367 ntBASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 H2AFZP6-201ENST00000444403 394 ntBASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 AC090804.1-201ENST00000448870 490 ntBASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 AC021660.1-201ENST00000465006 554 ntBASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 RPS12P31-201ENST00000491419 398 ntBASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 AC023424.1-201ENST00000496058 459 ntBASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 AC105233.1-201ENST00000498840 781 ntBASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 AC140172.1-201ENST00000502928 141 ntBASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 MYL12BP2-201ENST00000503948 512 ntBASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.82□□□□□ -1.64
RAB40ALP0C0E4 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms