Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CAPN1P07384 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.82□□□□□ -1.64
CAPN1P07384 OR51H2P-202ENST00000641424 3046 ntBASIC4.82□□□□□ -1.64
CAPN1P07384 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CAPN1P07384 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.81□□□□□ -1.64
CAPN1P07384 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CAPN1P07384 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CAPN1P07384 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CAPN1P07384 RN7SKP149-201ENST00000363008 344 ntBASIC4.81□□□□□ -1.64
CAPN1P07384 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.81□□□□□ -1.64
CAPN1P07384 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.81□□□□□ -1.64
CAPN1P07384 TRIM60P17-201ENST00000415181 719 ntBASIC4.81□□□□□ -1.64
CAPN1P07384 COX6B1P1-201ENST00000415962 213 ntBASIC4.81□□□□□ -1.64
CAPN1P07384 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CAPN1P07384 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.81□□□□□ -1.64
CAPN1P07384 GLUD1P9-201ENST00000420997 1173 ntBASIC4.81□□□□□ -1.64
CAPN1P07384 AC022022.1-201ENST00000430304 178 ntBASIC4.81□□□□□ -1.64
CAPN1P07384 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.81□□□□□ -1.64
CAPN1P07384 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.81□□□□□ -1.64
CAPN1P07384 AC073648.4-201ENST00000442655 781 ntBASIC4.81□□□□□ -1.64
CAPN1P07384 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.81□□□□□ -1.64
CAPN1P07384 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.81□□□□□ -1.64
CAPN1P07384 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.81□□□□□ -1.64
CAPN1P07384 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.81□□□□□ -1.64
CAPN1P07384 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.81□□□□□ -1.64
CAPN1P07384 AC090686.1-201ENST00000481577 749 ntBASIC4.81□□□□□ -1.64
CAPN1P07384 AC090142.2-201ENST00000483263 416 ntBASIC4.81□□□□□ -1.64
CAPN1P07384 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.81□□□□□ -1.64
CAPN1P07384 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.81□□□□□ -1.64
CAPN1P07384 AK4P6-201ENST00000505168 528 ntBASIC4.81□□□□□ -1.64
CAPN1P07384 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.81□□□□□ -1.64
CAPN1P07384 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.81□□□□□ -1.64
CAPN1P07384 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.81□□□□□ -1.64
CAPN1P07384 BTF3P13-201ENST00000513224 490 ntBASIC4.81□□□□□ -1.64
CAPN1P07384 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.81□□□□□ -1.64
CAPN1P07384 RNA5SP43-201ENST00000516559 110 ntBASIC4.81□□□□□ -1.64
CAPN1P07384 AC021006.3-201ENST00000530771 192 ntBASIC4.81□□□□□ -1.64
CAPN1P07384 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.81□□□□□ -1.64
CAPN1P07384 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
CAPN1P07384 AC104687.2-201ENST00000604442 342 ntBASIC4.81□□□□□ -1.64
CAPN1P07384 AC012213.4-201ENST00000606457 354 ntBASIC4.81□□□□□ -1.64
CAPN1P07384 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.81□□□□□ -1.64
CAPN1P07384 AC022106.2-201ENST00000620114 757 ntBASIC4.81□□□□□ -1.64
CAPN1P07384 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.81□□□□□ -1.64
CAPN1P07384 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.81□□□□□ -1.64
CAPN1P07384 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.81□□□□□ -1.64
CAPN1P07384 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.81□□□□□ -1.64
CAPN1P07384 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.81□□□□□ -1.64
CAPN1P07384 AC104118.1-201ENST00000607625 1589 ntBASIC4.81□□□□□ -1.64
CAPN1P07384 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.81□□□□□ -1.64
CAPN1P07384 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.81□□□□□ -1.64
CAPN1P07384 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
CAPN1P07384 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CAPN1P07384 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.81□□□□□ -1.64
CAPN1P07384 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.81□□□□□ -1.64
CAPN1P07384 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.81□□□□□ -1.64
CAPN1P07384 AC009643.2-201ENST00000603543 1448 ntBASIC4.8□□□□□ -1.64
CAPN1P07384 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CAPN1P07384 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CAPN1P07384 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CAPN1P07384 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CAPN1P07384 ECM1P2-201ENST00000503354 1577 ntBASIC4.8□□□□□ -1.64
CAPN1P07384 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CAPN1P07384 RN7SKP115-201ENST00000363177 317 ntBASIC4.8□□□□□ -1.64
CAPN1P07384 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CAPN1P07384 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CAPN1P07384 SNORA56-201ENST00000383966 129 ntBASIC4.8□□□□□ -1.64
CAPN1P07384 SNORA66-201ENST00000384792 133 ntBASIC4.8□□□□□ -1.64
CAPN1P07384 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CAPN1P07384 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CAPN1P07384 RN7SKP199-201ENST00000410325 305 ntBASIC4.8□□□□□ -1.64
CAPN1P07384 TMBIM7P-201ENST00000418074 855 ntBASIC4.8□□□□□ -1.64
CAPN1P07384 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CAPN1P07384 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.8□□□□□ -1.64
CAPN1P07384 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.8□□□□□ -1.64
CAPN1P07384 SCAND3P1-201ENST00000439854 1060 ntBASIC4.8□□□□□ -1.64
CAPN1P07384 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.8□□□□□ -1.64
CAPN1P07384 H2AFZP6-201ENST00000444403 394 ntBASIC4.8□□□□□ -1.64
CAPN1P07384 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.8□□□□□ -1.64
CAPN1P07384 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.8□□□□□ -1.64
CAPN1P07384 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.8□□□□□ -1.64
CAPN1P07384 SEPT7P6-201ENST00000469999 1143 ntBASIC4.8□□□□□ -1.64
CAPN1P07384 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.8□□□□□ -1.64
CAPN1P07384 RN7SL244P-201ENST00000493405 297 ntBASIC4.8□□□□□ -1.64
CAPN1P07384 AC140172.1-201ENST00000502928 141 ntBASIC4.8□□□□□ -1.64
CAPN1P07384 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CAPN1P07384 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.8□□□□□ -1.64
CAPN1P07384 AC009117.1-201ENST00000563948 554 ntBASIC4.8□□□□□ -1.64
CAPN1P07384 CYCSP40-201ENST00000575927 294 ntBASIC4.8□□□□□ -1.64
CAPN1P07384 AL353600.1-201ENST00000608148 251 ntBASIC4.8□□□□□ -1.64
CAPN1P07384 AC019131.2-201ENST00000609071 870 ntBASIC4.8□□□□□ -1.64
CAPN1P07384 AL049794.2-201ENST00000616301 365 ntBASIC4.8□□□□□ -1.64
CAPN1P07384 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.8□□□□□ -1.64
CAPN1P07384 AC015871.5-202ENST00000623252 701 ntBASIC4.8□□□□□ -1.64
CAPN1P07384 AP002967.1-201ENST00000624203 539 ntBASIC4.8□□□□□ -1.64
CAPN1P07384 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.8□□□□□ -1.64
CAPN1P07384 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.8□□□□□ -1.64
CAPN1P07384 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.8□□□□□ -1.64
CAPN1P07384 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.8□□□□□ -1.64
CAPN1P07384 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms