Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 SS18L2P2-201ENST00000583960 235 ntBASIC5.4□□□□□ -1.54
RB1P06400 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.4□□□□□ -1.54
RB1P06400 AL645927.2-201ENST00000618350 349 ntBASIC5.4□□□□□ -1.54
RB1P06400 AC021106.3-201ENST00000623925 531 ntBASIC5.4□□□□□ -1.54
RB1P06400 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.4□□□□□ -1.54
RB1P06400 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.4□□□□□ -1.54
RB1P06400 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.4□□□□□ -1.55
RB1P06400 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RB1P06400 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RB1P06400 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RB1P06400 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RB1P06400 AC099654.2-201ENST00000433031 1980 ntBASIC5.4□□□□□ -1.55
RB1P06400 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RB1P06400 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RB1P06400 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
RB1P06400 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RB1P06400 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RB1P06400 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
RB1P06400 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RB1P06400 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RB1P06400 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
RB1P06400 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RB1P06400 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.39□□□□□ -1.55
RB1P06400 SAMMSON-226ENST00000642089 1582 ntBASIC5.39□□□□□ -1.55
RB1P06400 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.39□□□□□ -1.55
RB1P06400 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
RB1P06400 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RB1P06400 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
RB1P06400 RNA5SP332-201ENST00000391063 115 ntBASIC5.39□□□□□ -1.55
RB1P06400 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.39□□□□□ -1.55
RB1P06400 AL136131.1-201ENST00000406079 803 ntBASIC5.39□□□□□ -1.55
RB1P06400 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.39□□□□□ -1.55
RB1P06400 AF186996.5-201ENST00000418098 904 ntBASIC5.39□□□□□ -1.55
RB1P06400 RPS27AP7-201ENST00000422792 455 ntBASIC5.39□□□□□ -1.55
RB1P06400 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RB1P06400 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.39□□□□□ -1.55
RB1P06400 NDUFB4P8-201ENST00000435351 367 ntBASIC5.39□□□□□ -1.55
RB1P06400 AP000949.1-201ENST00000438328 629 ntBASIC5.39□□□□□ -1.55
RB1P06400 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.39□□□□□ -1.55
RB1P06400 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.39□□□□□ -1.55
RB1P06400 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.39□□□□□ -1.55
RB1P06400 SLC25A18P1-201ENST00000449385 454 ntBASIC5.39□□□□□ -1.55
RB1P06400 AC037198.2-201ENST00000478845 733 ntBASIC5.39□□□□□ -1.55
RB1P06400 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.39□□□□□ -1.55
RB1P06400 AC010468.3-201ENST00000508225 458 ntBASIC5.39□□□□□ -1.55
RB1P06400 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.39□□□□□ -1.55
RB1P06400 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.39□□□□□ -1.55
RB1P06400 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.39□□□□□ -1.55
RB1P06400 RN7SL690P-201ENST00000582087 240 ntBASIC5.39□□□□□ -1.55
RB1P06400 AP005432.2-201ENST00000608162 586 ntBASIC5.39□□□□□ -1.55
RB1P06400 AC006338.2-201ENST00000616864 791 ntBASIC5.39□□□□□ -1.55
RB1P06400 AC009704.2-201ENST00000618739 483 ntBASIC5.39□□□□□ -1.55
RB1P06400 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RB1P06400 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
RB1P06400 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.39□□□□□ -1.55
RB1P06400 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.39□□□□□ -1.55
RB1P06400 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.39□□□□□ -1.55
RB1P06400 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RB1P06400 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RB1P06400 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RB1P06400 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RB1P06400 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.39□□□□□ -1.55
RB1P06400 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.38□□□□□ -1.55
RB1P06400 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
RB1P06400 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.38□□□□□ -1.55
RB1P06400 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
RB1P06400 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.38□□□□□ -1.55
RB1P06400 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RB1P06400 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
RB1P06400 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
RB1P06400 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
RB1P06400 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.38□□□□□ -1.55
RB1P06400 RNA5SP191-201ENST00000362585 102 ntBASIC5.38□□□□□ -1.55
RB1P06400 MIR589-201ENST00000385238 99 ntBASIC5.38□□□□□ -1.55
RB1P06400 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
RB1P06400 BX510359.2-201ENST00000417920 305 ntBASIC5.38□□□□□ -1.55
RB1P06400 ARL2BPP3-201ENST00000421226 480 ntBASIC5.38□□□□□ -1.55
RB1P06400 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC5.38□□□□□ -1.55
RB1P06400 SCAND3P1-201ENST00000439854 1060 ntBASIC5.38□□□□□ -1.55
RB1P06400 MTCYBP12-201ENST00000440559 1134 ntBASIC5.38□□□□□ -1.55
RB1P06400 AC023512.1-201ENST00000444513 499 ntBASIC5.38□□□□□ -1.55
RB1P06400 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.38□□□□□ -1.55
RB1P06400 PSMC1P13-201ENST00000458195 985 ntBASIC5.38□□□□□ -1.55
RB1P06400 AC103987.1-201ENST00000473394 348 ntBASIC5.38□□□□□ -1.55
RB1P06400 AC020779.1-201ENST00000478757 796 ntBASIC5.38□□□□□ -1.55
RB1P06400 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RB1P06400 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC5.38□□□□□ -1.55
RB1P06400 RPL23AP73-201ENST00000492507 471 ntBASIC5.38□□□□□ -1.55
RB1P06400 AC026979.1-201ENST00000492525 396 ntBASIC5.38□□□□□ -1.55
RB1P06400 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.38□□□□□ -1.55
RB1P06400 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.38□□□□□ -1.55
RB1P06400 AC027338.1-201ENST00000514840 825 ntBASIC5.38□□□□□ -1.55
RB1P06400 RN7SKP276-201ENST00000516242 268 ntBASIC5.38□□□□□ -1.55
RB1P06400 SNORA76.2-201ENST00000517095 137 ntBASIC5.38□□□□□ -1.55
RB1P06400 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.38□□□□□ -1.55
RB1P06400 MTND1P36-201ENST00000522384 936 ntBASIC5.38□□□□□ -1.55
RB1P06400 OR4R2P-201ENST00000530815 597 ntBASIC5.38□□□□□ -1.55
RB1P06400 AC009643.1-201ENST00000532030 391 ntBASIC5.38□□□□□ -1.55
RB1P06400 OR8X1P-201ENST00000534542 869 ntBASIC5.38□□□□□ -1.55
RB1P06400 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms