Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC005000.1-201ENST00000536192 288 ntBASIC4.18□□□□□ -1.74
HLA-DPB1P04440 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.18□□□□□ -1.74
HLA-DPB1P04440 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.18□□□□□ -1.74
HLA-DPB1P04440 AL022401.1-201ENST00000619498 108 ntBASIC4.18□□□□□ -1.74
HLA-DPB1P04440 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.18□□□□□ -1.74
HLA-DPB1P04440 TLK1P1-201ENST00000456760 2440 ntBASIC4.18□□□□□ -1.74
HLA-DPB1P04440 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DPB1P04440 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.18□□□□□ -1.74
HLA-DPB1P04440 SOCS5P3-201ENST00000425115 1576 ntBASIC4.18□□□□□ -1.74
HLA-DPB1P04440 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.18□□□□□ -1.74
HLA-DPB1P04440 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.18□□□□□ -1.74
HLA-DPB1P04440 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DPB1P04440 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.18□□□□□ -1.74
HLA-DPB1P04440 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DPB1P04440 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DPB1P04440 Z98755.1-201ENST00000407015 1384 ntBASIC4.17□□□□□ -1.74
HLA-DPB1P04440 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DPB1P04440 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DPB1P04440 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DPB1P04440 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DPB1P04440 SNORA74A-201ENST00000364089 198 ntBASIC4.17□□□□□ -1.74
HLA-DPB1P04440 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DPB1P04440 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
HLA-DPB1P04440 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DPB1P04440 SNORA51.8-201ENST00000384234 132 ntBASIC4.17□□□□□ -1.74
HLA-DPB1P04440 AL121834.1-202ENST00000404494 277 ntBASIC4.17□□□□□ -1.74
HLA-DPB1P04440 GTF2IP5-201ENST00000414608 731 ntBASIC4.17□□□□□ -1.74
HLA-DPB1P04440 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.17□□□□□ -1.74
HLA-DPB1P04440 AC004690.1-201ENST00000418216 328 ntBASIC4.17□□□□□ -1.74
HLA-DPB1P04440 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DPB1P04440 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.17□□□□□ -1.74
HLA-DPB1P04440 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.17□□□□□ -1.74
HLA-DPB1P04440 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.17□□□□□ -1.74
HLA-DPB1P04440 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.17□□□□□ -1.74
HLA-DPB1P04440 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.17□□□□□ -1.74
HLA-DPB1P04440 RPL23AP56-201ENST00000460778 453 ntBASIC4.17□□□□□ -1.74
HLA-DPB1P04440 SEPT7P6-201ENST00000469999 1143 ntBASIC4.17□□□□□ -1.74
HLA-DPB1P04440 AC091544.1-201ENST00000484702 348 ntBASIC4.17□□□□□ -1.74
HLA-DPB1P04440 AC093270.2-201ENST00000486157 792 ntBASIC4.17□□□□□ -1.74
HLA-DPB1P04440 NDUFA5P12-201ENST00000503796 343 ntBASIC4.17□□□□□ -1.74
HLA-DPB1P04440 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.17□□□□□ -1.74
HLA-DPB1P04440 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.17□□□□□ -1.74
HLA-DPB1P04440 PPBPP1-201ENST00000510807 373 ntBASIC4.17□□□□□ -1.74
HLA-DPB1P04440 RNA5SP446-201ENST00000515955 82 ntBASIC4.17□□□□□ -1.74
HLA-DPB1P04440 AC008694.2-201ENST00000517591 306 ntBASIC4.17□□□□□ -1.74
HLA-DPB1P04440 MORF4L1P3-201ENST00000525966 950 ntBASIC4.17□□□□□ -1.74
HLA-DPB1P04440 OR5AZ1P-201ENST00000527448 943 ntBASIC4.17□□□□□ -1.74
HLA-DPB1P04440 GCSHP4-201ENST00000538792 439 ntBASIC4.17□□□□□ -1.74
HLA-DPB1P04440 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DPB1P04440 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.17□□□□□ -1.74
HLA-DPB1P04440 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.17□□□□□ -1.74
HLA-DPB1P04440 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.17□□□□□ -1.74
HLA-DPB1P04440 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.17□□□□□ -1.74
HLA-DPB1P04440 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.17□□□□□ -1.74
HLA-DPB1P04440 AC093249.4-201ENST00000564755 259 ntBASIC4.17□□□□□ -1.74
HLA-DPB1P04440 AC091178.1-203ENST00000584586 279 ntBASIC4.17□□□□□ -1.74
HLA-DPB1P04440 AC011487.3-201ENST00000593607 453 ntBASIC4.17□□□□□ -1.74
HLA-DPB1P04440 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.17□□□□□ -1.74
HLA-DPB1P04440 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DPB1P04440 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.17□□□□□ -1.74
HLA-DPB1P04440 AL021707.7-201ENST00000607991 416 ntBASIC4.17□□□□□ -1.74
HLA-DPB1P04440 AC133644.2-201ENST00000608142 540 ntBASIC4.17□□□□□ -1.74
HLA-DPB1P04440 AL353726.1-201ENST00000614041 1000 ntBASIC4.17□□□□□ -1.74
HLA-DPB1P04440 AC023509.5-201ENST00000617434 807 ntBASIC4.17□□□□□ -1.74
HLA-DPB1P04440 AC068870.2-201ENST00000620635 389 ntBASIC4.17□□□□□ -1.74
HLA-DPB1P04440 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DPB1P04440 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DPB1P04440 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
HLA-DPB1P04440 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.17□□□□□ -1.74
HLA-DPB1P04440 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.17□□□□□ -1.74
HLA-DPB1P04440 NAMPTP1-201ENST00000440465 2514 ntBASIC4.17□□□□□ -1.74
HLA-DPB1P04440 INTS6P1-201ENST00000504674 2530 ntBASIC4.17□□□□□ -1.74
HLA-DPB1P04440 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DPB1P04440 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DPB1P04440 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DPB1P04440 OR51H2P-202ENST00000641424 3046 ntBASIC4.16□□□□□ -1.74
HLA-DPB1P04440 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DPB1P04440 AC005332.5-201ENST00000591222 2919 ntBASIC4.16□□□□□ -1.74
HLA-DPB1P04440 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.16□□□□□ -1.74
HLA-DPB1P04440 SAMMSON-226ENST00000642089 1582 ntBASIC4.16□□□□□ -1.74
HLA-DPB1P04440 AC020633.1-201ENST00000468439 2247 ntBASIC4.16□□□□□ -1.74
HLA-DPB1P04440 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
HLA-DPB1P04440 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.16□□□□□ -1.74
HLA-DPB1P04440 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HLA-DPB1P04440 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.16□□□□□ -1.74
HLA-DPB1P04440 AL160275.2-201ENST00000412010 394 ntBASIC4.16□□□□□ -1.74
HLA-DPB1P04440 GSTM3P2-201ENST00000412746 530 ntBASIC4.16□□□□□ -1.74
HLA-DPB1P04440 LINC00993-201ENST00000420453 540 ntBASIC4.16□□□□□ -1.74
HLA-DPB1P04440 RPL21P43-201ENST00000425440 472 ntBASIC4.16□□□□□ -1.74
HLA-DPB1P04440 RPL21P91-201ENST00000429231 479 ntBASIC4.16□□□□□ -1.74
HLA-DPB1P04440 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DPB1P04440 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DPB1P04440 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DPB1P04440 AC234781.3-201ENST00000452540 973 ntBASIC4.16□□□□□ -1.74
HLA-DPB1P04440 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DPB1P04440 AC006967.1-201ENST00000467608 589 ntBASIC4.16□□□□□ -1.74
HLA-DPB1P04440 OR11I1P-201ENST00000486033 954 ntBASIC4.16□□□□□ -1.74
HLA-DPB1P04440 RPL32P9-201ENST00000487963 407 ntBASIC4.16□□□□□ -1.74
HLA-DPB1P04440 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.16□□□□□ -1.74
HLA-DPB1P04440 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms