Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 SNORA37-201ENST00000384504 129 ntBASIC5.46□□□□□ -1.53
COL1A1P02452 MIR23B-201ENST00000384832 97 ntBASIC5.46□□□□□ -1.53
COL1A1P02452 SNORA48.7-201ENST00000391302 135 ntBASIC5.46□□□□□ -1.53
COL1A1P02452 CTSL3P-202ENST00000412179 788 ntBASIC5.46□□□□□ -1.53
COL1A1P02452 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.46□□□□□ -1.53
COL1A1P02452 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.46□□□□□ -1.53
COL1A1P02452 AC041039.1-201ENST00000485656 536 ntBASIC5.46□□□□□ -1.53
COL1A1P02452 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.46□□□□□ -1.53
COL1A1P02452 AC010476.1-201ENST00000519111 851 ntBASIC5.46□□□□□ -1.53
COL1A1P02452 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.46□□□□□ -1.53
COL1A1P02452 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.46□□□□□ -1.53
COL1A1P02452 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC5.46□□□□□ -1.53
COL1A1P02452 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.46□□□□□ -1.53
COL1A1P02452 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.46□□□□□ -1.54
COL1A1P02452 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
COL1A1P02452 OR51H2P-202ENST00000641424 3046 ntBASIC5.46□□□□□ -1.54
COL1A1P02452 AC003985.2-201ENST00000562268 1669 ntBASIC5.46□□□□□ -1.54
COL1A1P02452 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL1A1P02452 AL731532.2-201ENST00000623542 1953 ntBASIC5.46□□□□□ -1.54
COL1A1P02452 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL1A1P02452 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.46□□□□□ -1.54
COL1A1P02452 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL1A1P02452 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
COL1A1P02452 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
COL1A1P02452 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.46□□□□□ -1.54
COL1A1P02452 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
COL1A1P02452 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL1A1P02452 RNA5SP366-201ENST00000365454 123 ntBASIC5.45□□□□□ -1.54
COL1A1P02452 AL022722.2-201ENST00000402519 180 ntBASIC5.45□□□□□ -1.54
COL1A1P02452 NPM1P26-201ENST00000426339 738 ntBASIC5.45□□□□□ -1.54
COL1A1P02452 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.45□□□□□ -1.54
COL1A1P02452 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.45□□□□□ -1.54
COL1A1P02452 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.45□□□□□ -1.54
COL1A1P02452 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.45□□□□□ -1.54
COL1A1P02452 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.45□□□□□ -1.54
COL1A1P02452 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.45□□□□□ -1.54
COL1A1P02452 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
COL1A1P02452 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.45□□□□□ -1.54
COL1A1P02452 AC023762.1-201ENST00000603280 584 ntBASIC5.45□□□□□ -1.54
COL1A1P02452 ARF4P1-201ENST00000605447 541 ntBASIC5.45□□□□□ -1.54
COL1A1P02452 AL591034.3-201ENST00000605511 685 ntBASIC5.45□□□□□ -1.54
COL1A1P02452 MIR92B-201ENST00000607575 96 ntBASIC5.45□□□□□ -1.54
COL1A1P02452 AL161637.1-201ENST00000622380 412 ntBASIC5.45□□□□□ -1.54
COL1A1P02452 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.45□□□□□ -1.54
COL1A1P02452 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.45□□□□□ -1.54
COL1A1P02452 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.45□□□□□ -1.54
COL1A1P02452 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.45□□□□□ -1.54
COL1A1P02452 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
COL1A1P02452 NOL8P1-201ENST00000508336 3529 ntBASIC5.45□□□□□ -1.54
COL1A1P02452 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
COL1A1P02452 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL1A1P02452 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL1A1P02452 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL1A1P02452 RNU1-94P-201ENST00000362627 173 ntBASIC5.45□□□□□ -1.54
COL1A1P02452 AL080315.1-201ENST00000406055 466 ntBASIC5.45□□□□□ -1.54
COL1A1P02452 RPL23AP26-201ENST00000412728 464 ntBASIC5.45□□□□□ -1.54
COL1A1P02452 SNRPFP1-201ENST00000414761 252 ntBASIC5.45□□□□□ -1.54
COL1A1P02452 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.45□□□□□ -1.54
COL1A1P02452 NUTF2P3-201ENST00000448540 384 ntBASIC5.45□□□□□ -1.54
COL1A1P02452 AC053481.1-201ENST00000467217 306 ntBASIC5.45□□□□□ -1.54
COL1A1P02452 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.45□□□□□ -1.54
COL1A1P02452 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.45□□□□□ -1.54
COL1A1P02452 RNA5SP249-201ENST00000516127 99 ntBASIC5.45□□□□□ -1.54
COL1A1P02452 OR8A2P-201ENST00000528631 952 ntBASIC5.45□□□□□ -1.54
COL1A1P02452 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.45□□□□□ -1.54
COL1A1P02452 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.45□□□□□ -1.54
COL1A1P02452 AL023881.1-201ENST00000621088 301 ntBASIC5.45□□□□□ -1.54
COL1A1P02452 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL1A1P02452 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL1A1P02452 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.44□□□□□ -1.54
COL1A1P02452 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
COL1A1P02452 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
COL1A1P02452 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.44□□□□□ -1.54
COL1A1P02452 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.44□□□□□ -1.54
COL1A1P02452 EIF3EP2-201ENST00000423042 1814 ntBASIC5.44□□□□□ -1.54
COL1A1P02452 AL136164.3-201ENST00000624429 3978 ntBASIC5.44□□□□□ -1.54
COL1A1P02452 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL1A1P02452 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
COL1A1P02452 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.44□□□□□ -1.54
COL1A1P02452 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL1A1P02452 AMZ2P2-201ENST00000406819 1057 ntBASIC5.44□□□□□ -1.54
COL1A1P02452 HSFY6P-201ENST00000445573 403 ntBASIC5.44□□□□□ -1.54
COL1A1P02452 AC091167.1-201ENST00000492017 396 ntBASIC5.44□□□□□ -1.54
COL1A1P02452 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.44□□□□□ -1.54
COL1A1P02452 PPM1AP1-201ENST00000502740 1135 ntBASIC5.44□□□□□ -1.54
COL1A1P02452 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.44□□□□□ -1.54
COL1A1P02452 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.44□□□□□ -1.54
COL1A1P02452 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.44□□□□□ -1.54
COL1A1P02452 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.44□□□□□ -1.54
COL1A1P02452 AP003730.1-201ENST00000524605 285 ntBASIC5.44□□□□□ -1.54
COL1A1P02452 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.44□□□□□ -1.54
COL1A1P02452 PSMB7P1-201ENST00000556349 514 ntBASIC5.44□□□□□ -1.54
COL1A1P02452 IPO5P1-202ENST00000600039 287 ntBASIC5.44□□□□□ -1.54
COL1A1P02452 AC002069.2-201ENST00000603580 883 ntBASIC5.44□□□□□ -1.54
COL1A1P02452 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
COL1A1P02452 AP003497.2-201ENST00000624220 967 ntBASIC5.44□□□□□ -1.54
COL1A1P02452 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL1A1P02452 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL1A1P02452 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
COL1A1P02452 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms