Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TNFP01375 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
TNFP01375 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TNFP01375 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TNFP01375 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.49□□□□□ -1.69
TNFP01375 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TNFP01375 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
TNFP01375 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TNFP01375 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TNFP01375 CKS1BP6-201ENST00000424932 240 ntBASIC4.49□□□□□ -1.69
TNFP01375 EIF2S2P3-201ENST00000428356 999 ntBASIC4.49□□□□□ -1.69
TNFP01375 AC023141.6-201ENST00000429418 337 ntBASIC4.49□□□□□ -1.69
TNFP01375 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.49□□□□□ -1.69
TNFP01375 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.49□□□□□ -1.69
TNFP01375 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.49□□□□□ -1.69
TNFP01375 AC104651.2-201ENST00000447549 528 ntBASIC4.49□□□□□ -1.69
TNFP01375 AC011276.1-201ENST00000469688 323 ntBASIC4.49□□□□□ -1.69
TNFP01375 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.49□□□□□ -1.69
TNFP01375 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.49□□□□□ -1.69
TNFP01375 RNU6-513P-201ENST00000516104 104 ntBASIC4.49□□□□□ -1.69
TNFP01375 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.49□□□□□ -1.69
TNFP01375 LSM3P2-201ENST00000551246 273 ntBASIC4.49□□□□□ -1.69
TNFP01375 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.49□□□□□ -1.69
TNFP01375 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TNFP01375 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TNFP01375 UGT2B26P-201ENST00000508672 1613 ntBASIC4.49□□□□□ -1.69
TNFP01375 MAPK10-320ENST00000641462 6696 ntBASIC4.49□□□□□ -1.69
TNFP01375 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.49□□□□□ -1.69
TNFP01375 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
TNFP01375 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
TNFP01375 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
TNFP01375 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TNFP01375 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.48□□□□□ -1.69
TNFP01375 PROS2P-201ENST00000474651 1951 ntBASIC4.48□□□□□ -1.69
TNFP01375 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.48□□□□□ -1.69
TNFP01375 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
TNFP01375 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.48□□□□□ -1.69
TNFP01375 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
TNFP01375 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.48□□□□□ -1.69
TNFP01375 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.48□□□□□ -1.69
TNFP01375 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.48□□□□□ -1.69
TNFP01375 AC011998.1-201ENST00000433403 117 ntBASIC4.48□□□□□ -1.69
TNFP01375 NMNAT1P2-201ENST00000435192 860 ntBASIC4.48□□□□□ -1.69
TNFP01375 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.48□□□□□ -1.69
TNFP01375 RHEBP2-201ENST00000450289 600 ntBASIC4.48□□□□□ -1.69
TNFP01375 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.48□□□□□ -1.69
TNFP01375 AC069304.1-201ENST00000491593 704 ntBASIC4.48□□□□□ -1.69
TNFP01375 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.48□□□□□ -1.69
TNFP01375 IGLVIV-65-201ENST00000517313 360 ntBASIC4.48□□□□□ -1.69
TNFP01375 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.48□□□□□ -1.69
TNFP01375 AC068993.1-201ENST00000546724 589 ntBASIC4.48□□□□□ -1.69
TNFP01375 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.48□□□□□ -1.69
TNFP01375 PARP1P2-201ENST00000556806 195 ntBASIC4.48□□□□□ -1.69
TNFP01375 MIR4675-201ENST00000577898 77 ntBASIC4.48□□□□□ -1.69
TNFP01375 AL139041.1-201ENST00000605480 610 ntBASIC4.48□□□□□ -1.69
TNFP01375 AC090948.1-201ENST00000607464 549 ntBASIC4.48□□□□□ -1.69
TNFP01375 AC012409.3-201ENST00000611343 981 ntBASIC4.48□□□□□ -1.69
TNFP01375 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TNFP01375 AC073136.1-201ENST00000449426 2884 ntBASIC4.48□□□□□ -1.69
TNFP01375 TCP1P3-201ENST00000414406 1498 ntBASIC4.48□□□□□ -1.69
TNFP01375 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TNFP01375 AC026951.1-201ENST00000559530 2459 ntBASIC4.48□□□□□ -1.69
TNFP01375 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TNFP01375 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.48□□□□□ -1.69
TNFP01375 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TNFP01375 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TNFP01375 RNU4-25P-201ENST00000410569 230 ntBASIC4.47□□□□□ -1.69
TNFP01375 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TNFP01375 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.47□□□□□ -1.69
TNFP01375 CHIAP3-201ENST00000423668 1133 ntBASIC4.47□□□□□ -1.69
TNFP01375 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.47□□□□□ -1.69
TNFP01375 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.47□□□□□ -1.69
TNFP01375 RPL21P133-201ENST00000443666 476 ntBASIC4.47□□□□□ -1.69
TNFP01375 AL935212.3-201ENST00000450729 284 ntBASIC4.47□□□□□ -1.69
TNFP01375 RPL23AP24-201ENST00000458203 385 ntBASIC4.47□□□□□ -1.69
TNFP01375 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TNFP01375 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.47□□□□□ -1.69
TNFP01375 SUMO2P4-201ENST00000504193 276 ntBASIC4.47□□□□□ -1.69
TNFP01375 USP9YP2-201ENST00000504503 1000 ntBASIC4.47□□□□□ -1.69
TNFP01375 PRELID3BP5-201ENST00000508612 460 ntBASIC4.47□□□□□ -1.69
TNFP01375 USP9YP1-201ENST00000513521 1002 ntBASIC4.47□□□□□ -1.69
TNFP01375 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.47□□□□□ -1.69
TNFP01375 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.47□□□□□ -1.69
TNFP01375 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.47□□□□□ -1.69
TNFP01375 AC068831.4-201ENST00000556118 109 ntBASIC4.47□□□□□ -1.69
TNFP01375 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.47□□□□□ -1.69
TNFP01375 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.47□□□□□ -1.69
TNFP01375 AC091979.2-201ENST00000607514 214 ntBASIC4.47□□□□□ -1.69
TNFP01375 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.47□□□□□ -1.69
TNFP01375 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.47□□□□□ -1.69
TNFP01375 MLECP1-201ENST00000615893 709 ntBASIC4.47□□□□□ -1.69
TNFP01375 AC015914.2-201ENST00000618167 288 ntBASIC4.47□□□□□ -1.69
TNFP01375 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.47□□□□□ -1.69
TNFP01375 MIR6830-201ENST00000636015 70 ntBASIC4.47□□□□□ -1.69
TNFP01375 DHX9P1-201ENST00000436565 3076 ntBASIC4.47□□□□□ -1.69
TNFP01375 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.47□□□□□ -1.69
TNFP01375 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
TNFP01375 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.47□□□□□ -1.69
TNFP01375 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
TNFP01375 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms