Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
CLPTM1O96005 MTCO1P11-201ENST00000429111 1528 ntBASIC4.76□□□□□ -1.65
CLPTM1O96005 AL672167.1-203ENST00000641299 2975 ntBASIC4.76□□□□□ -1.65
CLPTM1O96005 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
CLPTM1O96005 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CLPTM1O96005 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.75□□□□□ -1.65
CLPTM1O96005 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.75□□□□□ -1.65
CLPTM1O96005 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLPTM1O96005 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.75□□□□□ -1.65
CLPTM1O96005 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.75□□□□□ -1.65
CLPTM1O96005 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLPTM1O96005 SNORA51.1-201ENST00000363243 140 ntBASIC4.75□□□□□ -1.65
CLPTM1O96005 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLPTM1O96005 RNU6-925P-201ENST00000384629 104 ntBASIC4.75□□□□□ -1.65
CLPTM1O96005 MIR551A-201ENST00000385042 96 ntBASIC4.75□□□□□ -1.65
CLPTM1O96005 MIR323B-201ENST00000385269 82 ntBASIC4.75□□□□□ -1.65
CLPTM1O96005 AL391422.1-201ENST00000402155 436 ntBASIC4.75□□□□□ -1.65
CLPTM1O96005 RSL24D1P1-201ENST00000404972 493 ntBASIC4.75□□□□□ -1.65
CLPTM1O96005 OR3A2-201ENST00000408891 1076 ntBASIC4.75□□□□□ -1.65
CLPTM1O96005 MORF4L1P7-201ENST00000426038 703 ntBASIC4.75□□□□□ -1.65
CLPTM1O96005 ZNF965P-201ENST00000432501 817 ntBASIC4.75□□□□□ -1.65
CLPTM1O96005 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.75□□□□□ -1.65
CLPTM1O96005 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.75□□□□□ -1.65
CLPTM1O96005 AL513321.1-201ENST00000441175 761 ntBASIC4.75□□□□□ -1.65
CLPTM1O96005 Z80107.2-201ENST00000445127 392 ntBASIC4.75□□□□□ -1.65
CLPTM1O96005 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.75□□□□□ -1.65
CLPTM1O96005 AC079168.1-201ENST00000458741 345 ntBASIC4.75□□□□□ -1.65
CLPTM1O96005 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.75□□□□□ -1.65
CLPTM1O96005 AC018638.3-201ENST00000461273 132 ntBASIC4.75□□□□□ -1.65
CLPTM1O96005 AC078857.1-201ENST00000469870 667 ntBASIC4.75□□□□□ -1.65
CLPTM1O96005 AC093663.2-201ENST00000484625 313 ntBASIC4.75□□□□□ -1.65
CLPTM1O96005 RN7SL184P-201ENST00000488308 297 ntBASIC4.75□□□□□ -1.65
CLPTM1O96005 AC119751.4-201ENST00000507498 357 ntBASIC4.75□□□□□ -1.65
CLPTM1O96005 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.75□□□□□ -1.65
CLPTM1O96005 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.75□□□□□ -1.65
CLPTM1O96005 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.75□□□□□ -1.65
CLPTM1O96005 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CLPTM1O96005 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.75□□□□□ -1.65
CLPTM1O96005 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLPTM1O96005 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.75□□□□□ -1.65
CLPTM1O96005 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.75□□□□□ -1.65
CLPTM1O96005 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.75□□□□□ -1.65
CLPTM1O96005 AC015720.2-201ENST00000567709 334 ntBASIC4.75□□□□□ -1.65
CLPTM1O96005 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.75□□□□□ -1.65
CLPTM1O96005 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.75□□□□□ -1.65
CLPTM1O96005 BNIP3P40-201ENST00000596017 556 ntBASIC4.75□□□□□ -1.65
CLPTM1O96005 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.75□□□□□ -1.65
CLPTM1O96005 AC018645.2-201ENST00000609151 472 ntBASIC4.75□□□□□ -1.65
CLPTM1O96005 AC025016.1-201ENST00000616746 682 ntBASIC4.75□□□□□ -1.65
CLPTM1O96005 AC010872.1-201ENST00000624225 675 ntBASIC4.75□□□□□ -1.65
CLPTM1O96005 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.75□□□□□ -1.65
CLPTM1O96005 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.75□□□□□ -1.65
CLPTM1O96005 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CLPTM1O96005 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CLPTM1O96005 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CLPTM1O96005 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLPTM1O96005 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.75□□□□□ -1.65
CLPTM1O96005 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CLPTM1O96005 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLPTM1O96005 AC091046.3-201ENST00000631455 1574 ntBASIC4.74□□□□□ -1.65
CLPTM1O96005 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLPTM1O96005 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLPTM1O96005 RNA5SP319-201ENST00000362768 119 ntBASIC4.74□□□□□ -1.65
CLPTM1O96005 RNA5SP234-201ENST00000363916 119 ntBASIC4.74□□□□□ -1.65
CLPTM1O96005 RNA5SP132-201ENST00000364725 118 ntBASIC4.74□□□□□ -1.65
CLPTM1O96005 SNORA16A-201ENST00000384342 137 ntBASIC4.74□□□□□ -1.65
CLPTM1O96005 RNA5SP372-201ENST00000390836 115 ntBASIC4.74□□□□□ -1.65
CLPTM1O96005 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.74□□□□□ -1.65
CLPTM1O96005 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.74□□□□□ -1.65
CLPTM1O96005 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.74□□□□□ -1.65
CLPTM1O96005 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4.74□□□□□ -1.65
CLPTM1O96005 AL357520.1-201ENST00000441557 453 ntBASIC4.74□□□□□ -1.65
CLPTM1O96005 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.74□□□□□ -1.65
CLPTM1O96005 SUMO2P1-206ENST00000445436 284 ntBASIC4.74□□□□□ -1.65
CLPTM1O96005 AC099063.2-201ENST00000446360 662 ntBASIC4.74□□□□□ -1.65
CLPTM1O96005 AL035090.1-201ENST00000454835 332 ntBASIC4.74□□□□□ -1.65
CLPTM1O96005 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.74□□□□□ -1.65
CLPTM1O96005 FCF1P6-201ENST00000456841 595 ntBASIC4.74□□□□□ -1.65
CLPTM1O96005 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC4.74□□□□□ -1.65
CLPTM1O96005 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.74□□□□□ -1.65
CLPTM1O96005 AC100832.1-201ENST00000471945 383 ntBASIC4.74□□□□□ -1.65
CLPTM1O96005 RN7SL817P-201ENST00000480777 288 ntBASIC4.74□□□□□ -1.65
CLPTM1O96005 RN7SL547P-201ENST00000490793 290 ntBASIC4.74□□□□□ -1.65
CLPTM1O96005 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.74□□□□□ -1.65
CLPTM1O96005 MTCO2P9-201ENST00000503214 694 ntBASIC4.74□□□□□ -1.65
CLPTM1O96005 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLPTM1O96005 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.74□□□□□ -1.65
CLPTM1O96005 HMGB1P46-201ENST00000520062 610 ntBASIC4.74□□□□□ -1.65
CLPTM1O96005 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.74□□□□□ -1.65
CLPTM1O96005 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CLPTM1O96005 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
CLPTM1O96005 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.74□□□□□ -1.65
CLPTM1O96005 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.74□□□□□ -1.65
CLPTM1O96005 AL121839.1-201ENST00000556233 1185 ntBASIC4.74□□□□□ -1.65
CLPTM1O96005 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.74□□□□□ -1.65
CLPTM1O96005 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.74□□□□□ -1.65
CLPTM1O96005 RPL26P30-202ENST00000602923 645 ntBASIC4.74□□□□□ -1.65
CLPTM1O96005 AC010245.2-201ENST00000606908 1167 ntBASIC4.74□□□□□ -1.65
CLPTM1O96005 MIR6768-201ENST00000610734 72 ntBASIC4.74□□□□□ -1.65
CLPTM1O96005 AC079395.2-201ENST00000610982 737 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms