Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AC008147.3-201ENST00000548666 354 ntBASIC4.59□□□□□ -1.67
CLDN9O95484 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.59□□□□□ -1.67
CLDN9O95484 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CLDN9O95484 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.59□□□□□ -1.67
CLDN9O95484 AC004948.1-201ENST00000609858 672 ntBASIC4.59□□□□□ -1.67
CLDN9O95484 FAM27B-201ENST00000610601 213 ntBASIC4.59□□□□□ -1.67
CLDN9O95484 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.59□□□□□ -1.67
CLDN9O95484 AL356274.1-201ENST00000617064 410 ntBASIC4.59□□□□□ -1.67
CLDN9O95484 AC234782.5-201ENST00000617723 324 ntBASIC4.59□□□□□ -1.67
CLDN9O95484 AL590410.1-201ENST00000617925 333 ntBASIC4.59□□□□□ -1.67
CLDN9O95484 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CLDN9O95484 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
CLDN9O95484 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
CLDN9O95484 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CLDN9O95484 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.59□□□□□ -1.68
CLDN9O95484 INTS6P1-201ENST00000504674 2530 ntBASIC4.58□□□□□ -1.68
CLDN9O95484 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CLDN9O95484 AC093775.1-201ENST00000624154 1868 ntBASIC4.58□□□□□ -1.68
CLDN9O95484 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN9O95484 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN9O95484 SAMMSON-226ENST00000642089 1582 ntBASIC4.58□□□□□ -1.68
CLDN9O95484 AC007382.1-201ENST00000624376 2618 ntBASIC4.58□□□□□ -1.68
CLDN9O95484 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CLDN9O95484 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN9O95484 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.58□□□□□ -1.68
CLDN9O95484 AL590762.2-201ENST00000395798 571 ntBASIC4.58□□□□□ -1.68
CLDN9O95484 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN9O95484 RPL23AP27-201ENST00000415161 451 ntBASIC4.58□□□□□ -1.68
CLDN9O95484 GLUD1P9-201ENST00000420997 1173 ntBASIC4.58□□□□□ -1.68
CLDN9O95484 AC093084.1-201ENST00000424233 687 ntBASIC4.58□□□□□ -1.68
CLDN9O95484 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.58□□□□□ -1.68
CLDN9O95484 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.58□□□□□ -1.68
CLDN9O95484 AL591363.1-201ENST00000450091 483 ntBASIC4.58□□□□□ -1.68
CLDN9O95484 RPS5P7-201ENST00000456664 608 ntBASIC4.58□□□□□ -1.68
CLDN9O95484 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.58□□□□□ -1.68
CLDN9O95484 NPM1P29-201ENST00000483112 803 ntBASIC4.58□□□□□ -1.68
CLDN9O95484 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN9O95484 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.58□□□□□ -1.68
CLDN9O95484 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.58□□□□□ -1.68
CLDN9O95484 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.58□□□□□ -1.68
CLDN9O95484 AC008033.2-201ENST00000542626 177 ntBASIC4.58□□□□□ -1.68
CLDN9O95484 AC027281.1-201ENST00000574178 758 ntBASIC4.58□□□□□ -1.68
CLDN9O95484 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.58□□□□□ -1.68
CLDN9O95484 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.58□□□□□ -1.68
CLDN9O95484 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.58□□□□□ -1.68
CLDN9O95484 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.58□□□□□ -1.68
CLDN9O95484 AC005520.3-201ENST00000602874 370 ntBASIC4.58□□□□□ -1.68
CLDN9O95484 AC130352.1-201ENST00000602979 661 ntBASIC4.58□□□□□ -1.68
CLDN9O95484 COX6CP4-201ENST00000605798 228 ntBASIC4.58□□□□□ -1.68
CLDN9O95484 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.58□□□□□ -1.68
CLDN9O95484 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN9O95484 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CLDN9O95484 AC083843.3-201ENST00000623679 2186 ntBASIC4.58□□□□□ -1.68
CLDN9O95484 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN9O95484 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN9O95484 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN9O95484 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN9O95484 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN9O95484 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN9O95484 VPS35P1-201ENST00000563400 1518 ntBASIC4.57□□□□□ -1.68
CLDN9O95484 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CLDN9O95484 RNU1-82P-201ENST00000390851 165 ntBASIC4.57□□□□□ -1.68
CLDN9O95484 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN9O95484 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.57□□□□□ -1.68
CLDN9O95484 AC022022.1-201ENST00000430304 178 ntBASIC4.57□□□□□ -1.68
CLDN9O95484 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN9O95484 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.57□□□□□ -1.68
CLDN9O95484 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN9O95484 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN9O95484 AP000936.3-201ENST00000438127 255 ntBASIC4.57□□□□□ -1.68
CLDN9O95484 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN9O95484 NPM1P33-201ENST00000438918 872 ntBASIC4.57□□□□□ -1.68
CLDN9O95484 AC010733.1-201ENST00000451515 401 ntBASIC4.57□□□□□ -1.68
CLDN9O95484 AC069277.2-201ENST00000454211 432 ntBASIC4.57□□□□□ -1.68
CLDN9O95484 AC037198.2-201ENST00000478845 733 ntBASIC4.57□□□□□ -1.68
CLDN9O95484 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN9O95484 AC025164.1-201ENST00000496249 478 ntBASIC4.57□□□□□ -1.68
CLDN9O95484 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.57□□□□□ -1.68
CLDN9O95484 AC091868.1-201ENST00000508746 304 ntBASIC4.57□□□□□ -1.68
CLDN9O95484 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.57□□□□□ -1.68
CLDN9O95484 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.57□□□□□ -1.68
CLDN9O95484 BTF3P13-201ENST00000513224 490 ntBASIC4.57□□□□□ -1.68
CLDN9O95484 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.57□□□□□ -1.68
CLDN9O95484 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN9O95484 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.57□□□□□ -1.68
CLDN9O95484 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.57□□□□□ -1.68
CLDN9O95484 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN9O95484 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN9O95484 AC024940.4-201ENST00000605507 246 ntBASIC4.57□□□□□ -1.68
CLDN9O95484 SNORD91B-202ENST00000608459 222 ntBASIC4.57□□□□□ -1.68
CLDN9O95484 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN9O95484 RMST_5.1-201ENST00000618704 126 ntBASIC4.57□□□□□ -1.68
CLDN9O95484 AL359757.1-201ENST00000623176 255 ntBASIC4.57□□□□□ -1.68
CLDN9O95484 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.57□□□□□ -1.68
CLDN9O95484 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
CLDN9O95484 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.57□□□□□ -1.68
CLDN9O95484 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN9O95484 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN9O95484 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN9O95484 MAPK10-286ENST00000641208 8747 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms