Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC005972.3-201ENST00000606304 481 ntBASIC1.97□□□□□ -2.09
USH2AO75445 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC1.97□□□□□ -2.09
USH2AO75445 ZNF592-203ENST00000560079 8131 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
USH2AO75445 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
USH2AO75445 AL355834.1-201ENST00000556602 3965 ntBASIC1.97□□□□□ -2.09
USH2AO75445 DDI2-202ENST00000480945 10625 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
USH2AO75445 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC1.97□□□□□ -2.09
USH2AO75445 OPHN1-201ENST00000355520 7879 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
USH2AO75445 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
USH2AO75445 DMD-211ENST00000378707 7410 ntTSL 5 BASIC1.97□□□□□ -2.09
USH2AO75445 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
USH2AO75445 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC1.97□□□□□ -2.09
USH2AO75445 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC1.97□□□□□ -2.09
USH2AO75445 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
USH2AO75445 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
USH2AO75445 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
USH2AO75445 AC105342.1-201ENST00000378334 6848 ntBASIC1.97□□□□□ -2.09
USH2AO75445 ANKRD36P1-201ENST00000344424 659 ntBASIC1.97□□□□□ -2.09
USH2AO75445 MIR30B-201ENST00000384850 88 ntBASIC1.97□□□□□ -2.09
USH2AO75445 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC1.97□□□□□ -2.09
USH2AO75445 RPL6P29-201ENST00000414863 865 ntBASIC1.97□□□□□ -2.09
USH2AO75445 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
USH2AO75445 NFYAP1-201ENST00000431953 972 ntBASIC1.97□□□□□ -2.09
USH2AO75445 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC1.97□□□□□ -2.09
USH2AO75445 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC1.97□□□□□ -2.09
USH2AO75445 BX510359.1-201ENST00000456973 237 ntBASIC1.97□□□□□ -2.09
USH2AO75445 ATP5G1P3-201ENST00000463301 410 ntBASIC1.97□□□□□ -2.09
USH2AO75445 RNU6-352P-201ENST00000516908 107 ntBASIC1.97□□□□□ -2.09
USH2AO75445 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC1.97□□□□□ -2.09
USH2AO75445 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC1.97□□□□□ -2.09
USH2AO75445 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC1.97□□□□□ -2.09
USH2AO75445 ELOCP35-201ENST00000604289 336 ntBASIC1.97□□□□□ -2.09
USH2AO75445 AP002360.3-201ENST00000607673 710 ntBASIC1.97□□□□□ -2.09
USH2AO75445 AL354798.1-201ENST00000622505 329 ntBASIC1.97□□□□□ -2.09
USH2AO75445 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
USH2AO75445 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
USH2AO75445 FN1-205ENST00000357867 7898 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
USH2AO75445 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC1.97□□□□□ -2.09
USH2AO75445 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
USH2AO75445 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
USH2AO75445 AL391684.1-202ENST00000641293 1636 ntBASIC1.97□□□□□ -2.09
USH2AO75445 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
USH2AO75445 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC1.97□□□□□ -2.09
USH2AO75445 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC1.97□□□□□ -2.09
USH2AO75445 DNASE1-202ENST00000407479 8552 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
USH2AO75445 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.97□□□□□ -2.09
USH2AO75445 MIR3065-201ENST00000390137 79 ntBASIC1.97□□□□□ -2.09
USH2AO75445 Z98745.1-201ENST00000402553 494 ntBASIC1.97□□□□□ -2.09
USH2AO75445 OR4F13P-201ENST00000428478 931 ntBASIC1.97□□□□□ -2.09
USH2AO75445 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.97□□□□□ -2.09
USH2AO75445 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC1.97□□□□□ -2.09
USH2AO75445 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC1.97□□□□□ -2.09
USH2AO75445 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
USH2AO75445 AL356608.1-201ENST00000610034 820 ntBASIC1.97□□□□□ -2.09
USH2AO75445 AC069542.2-201ENST00000624816 216 ntBASIC1.97□□□□□ -2.09
USH2AO75445 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
USH2AO75445 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
USH2AO75445 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
USH2AO75445 BTBD10P1-201ENST00000549824 1352 ntBASIC1.97□□□□□ -2.09
USH2AO75445 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC1.97□□□□□ -2.09
USH2AO75445 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
USH2AO75445 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC1.97□□□□□ -2.09
USH2AO75445 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
USH2AO75445 AL161912.2-201ENST00000565707 3007 ntBASIC1.97□□□□□ -2.09
USH2AO75445 AC016588.2-201ENST00000632484 3021 ntBASIC1.97□□□□□ -2.09
USH2AO75445 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
USH2AO75445 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC1.97□□□□□ -2.09
USH2AO75445 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
USH2AO75445 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
USH2AO75445 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
USH2AO75445 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
USH2AO75445 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC1.96□□□□□ -2.09
USH2AO75445 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC1.96□□□□□ -2.09
USH2AO75445 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.09
USH2AO75445 U3.28-201ENST00000391249 210 ntBASIC1.96□□□□□ -2.09
USH2AO75445 AL450992.3-201ENST00000413192 568 ntBASIC1.96□□□□□ -2.09
USH2AO75445 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC1.96□□□□□ -2.09
USH2AO75445 FABP3P2-201ENST00000453169 399 ntBASIC1.96□□□□□ -2.09
USH2AO75445 RPS4XP12-201ENST00000461747 709 ntBASIC1.96□□□□□ -2.09
USH2AO75445 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC1.96□□□□□ -2.09
USH2AO75445 AL592436.1-201ENST00000605135 558 ntBASIC1.96□□□□□ -2.09
USH2AO75445 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC1.96□□□□□ -2.09
USH2AO75445 TUG1_1.1-201ENST00000610654 145 ntBASIC1.96□□□□□ -2.09
USH2AO75445 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC1.96□□□□□ -2.09
USH2AO75445 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC1.96□□□□□ -2.1
USH2AO75445 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
USH2AO75445 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC1.96□□□□□ -2.1
USH2AO75445 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC1.96□□□□□ -2.1
USH2AO75445 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
USH2AO75445 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC1.96□□□□□ -2.1
USH2AO75445 AC074029.4-201ENST00000624796 1859 ntBASIC1.96□□□□□ -2.1
USH2AO75445 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
USH2AO75445 LCOR-201ENST00000286067 4542 ntBASIC1.96□□□□□ -2.1
USH2AO75445 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
USH2AO75445 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
USH2AO75445 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
USH2AO75445 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
USH2AO75445 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
USH2AO75445 RNA5SP247-201ENST00000411181 105 ntBASIC1.96□□□□□ -2.1
USH2AO75445 HSPE1P12-201ENST00000412576 301 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms