Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.74□□□□□ -1.65
ZIC3O60481 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.74□□□□□ -1.65
ZIC3O60481 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.74□□□□□ -1.65
ZIC3O60481 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.74□□□□□ -1.65
ZIC3O60481 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.74□□□□□ -1.65
ZIC3O60481 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
ZIC3O60481 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.74□□□□□ -1.65
ZIC3O60481 RPL6P9-201ENST00000466502 859 ntBASIC4.74□□□□□ -1.65
ZIC3O60481 AC021205.1-201ENST00000468797 348 ntBASIC4.74□□□□□ -1.65
ZIC3O60481 RPS18P6-201ENST00000476880 458 ntBASIC4.74□□□□□ -1.65
ZIC3O60481 RPL7P41-201ENST00000485823 957 ntBASIC4.74□□□□□ -1.65
ZIC3O60481 RPS12P31-201ENST00000491419 398 ntBASIC4.74□□□□□ -1.65
ZIC3O60481 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.74□□□□□ -1.65
ZIC3O60481 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.74□□□□□ -1.65
ZIC3O60481 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.74□□□□□ -1.65
ZIC3O60481 AC006427.1-201ENST00000514359 712 ntBASIC4.74□□□□□ -1.65
ZIC3O60481 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.74□□□□□ -1.65
ZIC3O60481 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.74□□□□□ -1.65
ZIC3O60481 OR10V3P-201ENST00000525712 725 ntBASIC4.74□□□□□ -1.65
ZIC3O60481 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.74□□□□□ -1.65
ZIC3O60481 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.74□□□□□ -1.65
ZIC3O60481 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.74□□□□□ -1.65
ZIC3O60481 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.74□□□□□ -1.65
ZIC3O60481 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.74□□□□□ -1.65
ZIC3O60481 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ZIC3O60481 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.74□□□□□ -1.65
ZIC3O60481 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC4.74□□□□□ -1.65
ZIC3O60481 AC016180.1-201ENST00000567945 403 ntBASIC4.74□□□□□ -1.65
ZIC3O60481 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC4.74□□□□□ -1.65
ZIC3O60481 AC008814.1-201ENST00000603797 406 ntBASIC4.74□□□□□ -1.65
ZIC3O60481 AC011626.1-201ENST00000604710 562 ntBASIC4.74□□□□□ -1.65
ZIC3O60481 AC024060.1-201ENST00000607052 494 ntBASIC4.74□□□□□ -1.65
ZIC3O60481 AL139407.1-201ENST00000613826 1175 ntBASIC4.74□□□□□ -1.65
ZIC3O60481 AC004232.3-201ENST00000622977 525 ntBASIC4.74□□□□□ -1.65
ZIC3O60481 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
ZIC3O60481 AC135068.12-201ENST00000637370 931 ntBASIC4.74□□□□□ -1.65
ZIC3O60481 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
ZIC3O60481 AC073869.7-201ENST00000640874 297 ntBASIC4.74□□□□□ -1.65
ZIC3O60481 SAMMSON-227ENST00000642114 1199 ntBASIC4.74□□□□□ -1.65
ZIC3O60481 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC4.74□□□□□ -1.65
ZIC3O60481 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.74□□□□□ -1.65
ZIC3O60481 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
ZIC3O60481 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
ZIC3O60481 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ZIC3O60481 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.74□□□□□ -1.65
ZIC3O60481 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.73□□□□□ -1.65
ZIC3O60481 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ZIC3O60481 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ZIC3O60481 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
ZIC3O60481 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ZIC3O60481 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.73□□□□□ -1.65
ZIC3O60481 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ZIC3O60481 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.73□□□□□ -1.65
ZIC3O60481 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
ZIC3O60481 METTL21EP-201ENST00000298105 713 ntBASIC4.73□□□□□ -1.65
ZIC3O60481 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
ZIC3O60481 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
ZIC3O60481 MIR133A2-201ENST00000347538 102 ntBASIC4.73□□□□□ -1.65
ZIC3O60481 RNU6-236P-201ENST00000363886 106 ntBASIC4.73□□□□□ -1.65
ZIC3O60481 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ZIC3O60481 RPL7P27-201ENST00000403775 720 ntBASIC4.73□□□□□ -1.65
ZIC3O60481 AP002530.1-201ENST00000405705 684 ntBASIC4.73□□□□□ -1.65
ZIC3O60481 U3.36-201ENST00000408418 213 ntBASIC4.73□□□□□ -1.65
ZIC3O60481 PCNPP4-201ENST00000414817 517 ntBASIC4.73□□□□□ -1.65
ZIC3O60481 AL449283.1-202ENST00000418249 604 ntBASIC4.73□□□□□ -1.65
ZIC3O60481 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
ZIC3O60481 OR6K4P-201ENST00000423179 955 ntBASIC4.73□□□□□ -1.65
ZIC3O60481 AC092648.1-201ENST00000425870 423 ntBASIC4.73□□□□□ -1.65
ZIC3O60481 HNRNPA1P29-201ENST00000426409 879 ntBASIC4.73□□□□□ -1.65
ZIC3O60481 CACYBPP1-201ENST00000438592 684 ntBASIC4.73□□□□□ -1.65
ZIC3O60481 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.73□□□□□ -1.65
ZIC3O60481 BX284632.1-201ENST00000478218 541 ntBASIC4.73□□□□□ -1.65
ZIC3O60481 AC004815.1-201ENST00000484185 331 ntBASIC4.73□□□□□ -1.65
ZIC3O60481 AC021146.5-201ENST00000503544 545 ntBASIC4.73□□□□□ -1.65
ZIC3O60481 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.73□□□□□ -1.65
ZIC3O60481 AC092709.1-201ENST00000521355 1045 ntBASIC4.73□□□□□ -1.65
ZIC3O60481 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.73□□□□□ -1.65
ZIC3O60481 AC022832.1-201ENST00000530718 645 ntBASIC4.73□□□□□ -1.65
ZIC3O60481 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.73□□□□□ -1.65
ZIC3O60481 AC087897.1-201ENST00000550134 156 ntBASIC4.73□□□□□ -1.65
ZIC3O60481 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
ZIC3O60481 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
ZIC3O60481 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
ZIC3O60481 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC4.73□□□□□ -1.65
ZIC3O60481 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.73□□□□□ -1.65
ZIC3O60481 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.73□□□□□ -1.65
ZIC3O60481 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.73□□□□□ -1.65
ZIC3O60481 SS18L2P2-201ENST00000583960 235 ntBASIC4.73□□□□□ -1.65
ZIC3O60481 AC234772.3-201ENST00000602277 528 ntBASIC4.73□□□□□ -1.65
ZIC3O60481 AC096586.1-201ENST00000610267 561 ntBASIC4.73□□□□□ -1.65
ZIC3O60481 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.73□□□□□ -1.65
ZIC3O60481 AC009159.2-201ENST00000617603 606 ntBASIC4.73□□□□□ -1.65
ZIC3O60481 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ZIC3O60481 AC099494.2-201ENST00000623371 978 ntBASIC4.73□□□□□ -1.65
ZIC3O60481 AC139713.2-210ENST00000641741 992 ntBASIC4.73□□□□□ -1.65
ZIC3O60481 AC005005.4-201ENST00000623789 16698 ntBASIC4.73□□□□□ -1.65
ZIC3O60481 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ZIC3O60481 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
ZIC3O60481 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ZIC3O60481 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms