Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.74□□□□□ -1.65
KDELR3O43731 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.74□□□□□ -1.65
KDELR3O43731 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.74□□□□□ -1.65
KDELR3O43731 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KDELR3O43731 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KDELR3O43731 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.74□□□□□ -1.65
KDELR3O43731 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
KDELR3O43731 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.74□□□□□ -1.65
KDELR3O43731 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KDELR3O43731 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.74□□□□□ -1.65
KDELR3O43731 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.74□□□□□ -1.65
KDELR3O43731 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
KDELR3O43731 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
KDELR3O43731 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
KDELR3O43731 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
KDELR3O43731 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KDELR3O43731 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
KDELR3O43731 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
KDELR3O43731 AC135352.1-201ENST00000506173 1418 ntBASIC4.73□□□□□ -1.65
KDELR3O43731 KARSP3-201ENST00000571212 1504 ntBASIC4.73□□□□□ -1.65
KDELR3O43731 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KDELR3O43731 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.73□□□□□ -1.65
KDELR3O43731 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
KDELR3O43731 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.73□□□□□ -1.65
KDELR3O43731 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.73□□□□□ -1.65
KDELR3O43731 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.73□□□□□ -1.65
KDELR3O43731 RN7SKP115-201ENST00000363177 317 ntBASIC4.73□□□□□ -1.65
KDELR3O43731 RNU1-83P-201ENST00000363426 164 ntBASIC4.73□□□□□ -1.65
KDELR3O43731 SNORD113.2-201ENST00000364166 89 ntBASIC4.73□□□□□ -1.65
KDELR3O43731 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
KDELR3O43731 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
KDELR3O43731 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
KDELR3O43731 RNU6-167P-201ENST00000384292 106 ntBASIC4.73□□□□□ -1.65
KDELR3O43731 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
KDELR3O43731 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
KDELR3O43731 AC096644.3-201ENST00000416788 338 ntBASIC4.73□□□□□ -1.65
KDELR3O43731 AC013470.3-201ENST00000420252 1194 ntBASIC4.73□□□□□ -1.65
KDELR3O43731 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.73□□□□□ -1.65
KDELR3O43731 AL138878.2-201ENST00000440581 1241 ntBASIC4.73□□□□□ -1.65
KDELR3O43731 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.73□□□□□ -1.65
KDELR3O43731 TDGF1P1-201ENST00000445734 527 ntBASIC4.73□□□□□ -1.65
KDELR3O43731 SCARNA10-201ENST00000459255 330 ntBASIC4.73□□□□□ -1.65
KDELR3O43731 MTND4LP2-201ENST00000502312 285 ntBASIC4.73□□□□□ -1.65
KDELR3O43731 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.73□□□□□ -1.65
KDELR3O43731 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.73□□□□□ -1.65
KDELR3O43731 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.73□□□□□ -1.65
KDELR3O43731 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.73□□□□□ -1.65
KDELR3O43731 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.73□□□□□ -1.65
KDELR3O43731 LSM3P2-201ENST00000551246 273 ntBASIC4.73□□□□□ -1.65
KDELR3O43731 AC022960.2-201ENST00000616300 666 ntBASIC4.73□□□□□ -1.65
KDELR3O43731 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.73□□□□□ -1.65
KDELR3O43731 MIR7703-201ENST00000620784 77 ntBASIC4.73□□□□□ -1.65
KDELR3O43731 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
KDELR3O43731 AL359757.1-201ENST00000623176 255 ntBASIC4.73□□□□□ -1.65
KDELR3O43731 AP003400.2-201ENST00000624036 666 ntBASIC4.73□□□□□ -1.65
KDELR3O43731 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KDELR3O43731 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.73□□□□□ -1.65
KDELR3O43731 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.73□□□□□ -1.65
KDELR3O43731 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
KDELR3O43731 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KDELR3O43731 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KDELR3O43731 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KDELR3O43731 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KDELR3O43731 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.72□□□□□ -1.65
KDELR3O43731 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.72□□□□□ -1.65
KDELR3O43731 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
KDELR3O43731 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KDELR3O43731 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KDELR3O43731 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KDELR3O43731 OR4K15-201ENST00000305051 1216 ntBASIC4.72□□□□□ -1.65
KDELR3O43731 OR56B2P-201ENST00000317102 954 ntBASIC4.72□□□□□ -1.65
KDELR3O43731 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KDELR3O43731 SNORA71.2-201ENST00000364941 134 ntBASIC4.72□□□□□ -1.65
KDELR3O43731 MIR192-201ENST00000384915 110 ntBASIC4.72□□□□□ -1.65
KDELR3O43731 AC092570.3-201ENST00000420113 693 ntBASIC4.72□□□□□ -1.65
KDELR3O43731 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.72□□□□□ -1.65
KDELR3O43731 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.72□□□□□ -1.65
KDELR3O43731 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.72□□□□□ -1.65
KDELR3O43731 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.72□□□□□ -1.65
KDELR3O43731 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.72□□□□□ -1.65
KDELR3O43731 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
KDELR3O43731 RPL23AP72-201ENST00000492447 435 ntBASIC4.72□□□□□ -1.65
KDELR3O43731 AC008897.1-201ENST00000494006 347 ntBASIC4.72□□□□□ -1.65
KDELR3O43731 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.72□□□□□ -1.65
KDELR3O43731 MIR4700-201ENST00000578311 74 ntBASIC4.72□□□□□ -1.65
KDELR3O43731 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.72□□□□□ -1.65
KDELR3O43731 RN7SL435P-201ENST00000584418 282 ntBASIC4.72□□□□□ -1.65
KDELR3O43731 AC005520.3-201ENST00000602874 370 ntBASIC4.72□□□□□ -1.65
KDELR3O43731 AC130352.1-201ENST00000602979 661 ntBASIC4.72□□□□□ -1.65
KDELR3O43731 AC104785.1-201ENST00000603220 588 ntBASIC4.72□□□□□ -1.65
KDELR3O43731 AL133338.2-201ENST00000604292 736 ntBASIC4.72□□□□□ -1.65
KDELR3O43731 AC096553.1-201ENST00000605169 829 ntBASIC4.72□□□□□ -1.65
KDELR3O43731 AL133406.3-201ENST00000606817 541 ntBASIC4.72□□□□□ -1.65
KDELR3O43731 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.72□□□□□ -1.65
KDELR3O43731 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.72□□□□□ -1.65
KDELR3O43731 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
KDELR3O43731 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
KDELR3O43731 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
KDELR3O43731 THAP12P5-201ENST00000405864 2275 ntBASIC4.72□□□□□ -1.65
KDELR3O43731 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms