Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 MIR7155-201ENST00000615925 56 ntBASIC5.11□□□□□ -1.59
LDB2O43679 AL669942.2-201ENST00000620352 697 ntBASIC5.11□□□□□ -1.59
LDB2O43679 AC099494.2-201ENST00000623371 978 ntBASIC5.11□□□□□ -1.59
LDB2O43679 AL078595.3-201ENST00000623815 1166 ntBASIC5.11□□□□□ -1.59
LDB2O43679 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
LDB2O43679 CASC19-222ENST00000641321 1173 ntBASIC5.11□□□□□ -1.59
LDB2O43679 SEPT7P7-201ENST00000420492 1301 ntBASIC5.11□□□□□ -1.59
LDB2O43679 AC008432.1-201ENST00000615912 1320 ntBASIC5.11□□□□□ -1.59
LDB2O43679 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
LDB2O43679 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.11□□□□□ -1.59
LDB2O43679 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LDB2O43679 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.11□□□□□ -1.59
LDB2O43679 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LDB2O43679 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
LDB2O43679 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.11□□□□□ -1.59
LDB2O43679 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.11□□□□□ -1.59
LDB2O43679 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
LDB2O43679 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LDB2O43679 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
LDB2O43679 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.11□□□□□ -1.59
LDB2O43679 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LDB2O43679 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.11□□□□□ -1.59
LDB2O43679 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.11□□□□□ -1.59
LDB2O43679 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.11□□□□□ -1.59
LDB2O43679 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
LDB2O43679 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
LDB2O43679 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
LDB2O43679 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
LDB2O43679 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LDB2O43679 RNU6-252P-201ENST00000363232 107 ntBASIC5.1□□□□□ -1.59
LDB2O43679 RN7SKP113-201ENST00000363891 295 ntBASIC5.1□□□□□ -1.59
LDB2O43679 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LDB2O43679 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
LDB2O43679 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LDB2O43679 RN7SKP213-201ENST00000410746 298 ntBASIC5.1□□□□□ -1.59
LDB2O43679 UBE2V1P9-201ENST00000414760 368 ntBASIC5.1□□□□□ -1.59
LDB2O43679 RPL23AP27-201ENST00000415161 451 ntBASIC5.1□□□□□ -1.59
LDB2O43679 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.1□□□□□ -1.59
LDB2O43679 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.1□□□□□ -1.59
LDB2O43679 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC5.1□□□□□ -1.59
LDB2O43679 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.1□□□□□ -1.59
LDB2O43679 RPS27P18-201ENST00000431701 247 ntBASIC5.1□□□□□ -1.59
LDB2O43679 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC5.1□□□□□ -1.59
LDB2O43679 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.1□□□□□ -1.59
LDB2O43679 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LDB2O43679 KNOP1P3-201ENST00000446933 426 ntBASIC5.1□□□□□ -1.59
LDB2O43679 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.1□□□□□ -1.59
LDB2O43679 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.1□□□□□ -1.59
LDB2O43679 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.1□□□□□ -1.59
LDB2O43679 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LDB2O43679 BX284632.1-201ENST00000478218 541 ntBASIC5.1□□□□□ -1.59
LDB2O43679 HMGB1P38-201ENST00000490557 577 ntBASIC5.1□□□□□ -1.59
LDB2O43679 RN7SL808P-201ENST00000496066 299 ntBASIC5.1□□□□□ -1.59
LDB2O43679 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LDB2O43679 SNRPCP2-201ENST00000504370 475 ntBASIC5.1□□□□□ -1.59
LDB2O43679 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC5.1□□□□□ -1.59
LDB2O43679 MTND5P11-201ENST00000511037 1812 ntBASIC5.1□□□□□ -1.59
LDB2O43679 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.1□□□□□ -1.59
LDB2O43679 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LDB2O43679 RFPL4AP3-201ENST00000515267 345 ntBASIC5.1□□□□□ -1.59
LDB2O43679 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.1□□□□□ -1.59
LDB2O43679 NPM1P35-201ENST00000533043 868 ntBASIC5.1□□□□□ -1.59
LDB2O43679 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.1□□□□□ -1.59
LDB2O43679 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LDB2O43679 AL359219.2-201ENST00000555184 348 ntBASIC5.1□□□□□ -1.59
LDB2O43679 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.1□□□□□ -1.59
LDB2O43679 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.1□□□□□ -1.59
LDB2O43679 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.1□□□□□ -1.59
LDB2O43679 AC007342.5-201ENST00000571340 2142 ntBASIC5.1□□□□□ -1.59
LDB2O43679 MIR3691-201ENST00000578066 90 ntBASIC5.1□□□□□ -1.59
LDB2O43679 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.1□□□□□ -1.59
LDB2O43679 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.1□□□□□ -1.59
LDB2O43679 AP000473.2-201ENST00000602659 1537 ntBASIC5.1□□□□□ -1.59
LDB2O43679 MTCO2P22-201ENST00000603246 681 ntBASIC5.1□□□□□ -1.59
LDB2O43679 RPP40P2-201ENST00000603596 712 ntBASIC5.1□□□□□ -1.59
LDB2O43679 AL445222.1-201ENST00000607259 628 ntBASIC5.1□□□□□ -1.59
LDB2O43679 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.1□□□□□ -1.59
LDB2O43679 CYCSP41-201ENST00000616920 296 ntBASIC5.1□□□□□ -1.59
LDB2O43679 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LDB2O43679 AC015660.5-201ENST00000623238 564 ntBASIC5.1□□□□□ -1.59
LDB2O43679 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.1□□□□□ -1.59
LDB2O43679 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.1□□□□□ -1.59
LDB2O43679 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.1□□□□□ -1.59
LDB2O43679 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.1□□□□□ -1.59
LDB2O43679 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
LDB2O43679 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LDB2O43679 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.1□□□□□ -1.59
LDB2O43679 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.09□□□□□ -1.59
LDB2O43679 ZNF733P-202ENST00000444809 1573 ntBASIC5.09□□□□□ -1.59
LDB2O43679 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.09□□□□□ -1.59
LDB2O43679 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.09□□□□□ -1.59
LDB2O43679 OR13C3-201ENST00000374781 1108 ntBASIC5.09□□□□□ -1.59
LDB2O43679 RNU6-796P-201ENST00000391086 107 ntBASIC5.09□□□□□ -1.59
LDB2O43679 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.09□□□□□ -1.59
LDB2O43679 AL158825.1-201ENST00000414735 521 ntBASIC5.09□□□□□ -1.59
LDB2O43679 AC234781.4-201ENST00000419384 244 ntBASIC5.09□□□□□ -1.59
LDB2O43679 AL034379.1-201ENST00000423216 253 ntBASIC5.09□□□□□ -1.59
LDB2O43679 AC115285.1-201ENST00000424879 736 ntBASIC5.09□□□□□ -1.59
LDB2O43679 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.09□□□□□ -1.59
LDB2O43679 FO393414.1-201ENST00000428697 1184 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms