Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.83□□□□□ -1.64
TO15178 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.83□□□□□ -1.64
TO15178 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.83□□□□□ -1.64
TO15178 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.83□□□□□ -1.64
TO15178 AC027369.5-201ENST00000533838 755 ntBASIC4.83□□□□□ -1.64
TO15178 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.83□□□□□ -1.64
TO15178 AC125612.1-201ENST00000547580 377 ntBASIC4.83□□□□□ -1.64
TO15178 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.83□□□□□ -1.64
TO15178 AC004825.1-201ENST00000555068 586 ntBASIC4.83□□□□□ -1.64
TO15178 AC068714.1-201ENST00000559623 800 ntBASIC4.83□□□□□ -1.64
TO15178 MTCYBP13-201ENST00000578634 1093 ntBASIC4.83□□□□□ -1.64
TO15178 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TO15178 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.83□□□□□ -1.64
TO15178 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.83□□□□□ -1.64
TO15178 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.83□□□□□ -1.64
TO15178 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.83□□□□□ -1.64
TO15178 AC026741.1-201ENST00000605892 482 ntBASIC4.83□□□□□ -1.64
TO15178 AC016957.2-201ENST00000616998 848 ntBASIC4.83□□□□□ -1.64
TO15178 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.83□□□□□ -1.64
TO15178 SAMMSON-227ENST00000642114 1199 ntBASIC4.83□□□□□ -1.64
TO15178 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
TO15178 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TO15178 CR788268.1-201ENST00000603931 1809 ntBASIC4.83□□□□□ -1.64
TO15178 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TO15178 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TO15178 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TO15178 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TO15178 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.83□□□□□ -1.64
TO15178 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.82□□□□□ -1.64
TO15178 AP001642.1-201ENST00000624727 2117 ntBASIC4.82□□□□□ -1.64
TO15178 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TO15178 AL451142.2-201ENST00000429076 2090 ntBASIC4.82□□□□□ -1.64
TO15178 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.82□□□□□ -1.64
TO15178 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.82□□□□□ -1.64
TO15178 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
TO15178 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TO15178 ZNF652P1-201ENST00000442420 1309 ntBASIC4.82□□□□□ -1.64
TO15178 MTND4P9-201ENST00000507819 1346 ntBASIC4.82□□□□□ -1.64
TO15178 AC008432.1-201ENST00000615912 1320 ntBASIC4.82□□□□□ -1.64
TO15178 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TO15178 SNORA17.1-201ENST00000362945 126 ntBASIC4.82□□□□□ -1.64
TO15178 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.82□□□□□ -1.64
TO15178 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TO15178 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
TO15178 UBE2V1P11-201ENST00000411559 285 ntBASIC4.82□□□□□ -1.64
TO15178 AC073136.2-201ENST00000417282 849 ntBASIC4.82□□□□□ -1.64
TO15178 EI24P4-201ENST00000423683 1078 ntBASIC4.82□□□□□ -1.64
TO15178 NANOGP4-201ENST00000427230 913 ntBASIC4.82□□□□□ -1.64
TO15178 AL035458.1-201ENST00000433096 585 ntBASIC4.82□□□□□ -1.64
TO15178 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.82□□□□□ -1.64
TO15178 RPL12P46-201ENST00000436610 195 ntBASIC4.82□□□□□ -1.64
TO15178 RPS29P10-201ENST00000439197 166 ntBASIC4.82□□□□□ -1.64
TO15178 ELOCP10-201ENST00000440624 327 ntBASIC4.82□□□□□ -1.64
TO15178 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.82□□□□□ -1.64
TO15178 AL389915.2-201ENST00000454576 441 ntBASIC4.82□□□□□ -1.64
TO15178 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.82□□□□□ -1.64
TO15178 AC079841.1-201ENST00000481228 950 ntBASIC4.82□□□□□ -1.64
TO15178 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.82□□□□□ -1.64
TO15178 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.82□□□□□ -1.64
TO15178 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.82□□□□□ -1.64
TO15178 AC013701.1-201ENST00000522657 465 ntBASIC4.82□□□□□ -1.64
TO15178 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.82□□□□□ -1.64
TO15178 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.82□□□□□ -1.64
TO15178 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.82□□□□□ -1.64
TO15178 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.82□□□□□ -1.64
TO15178 AC104229.1-201ENST00000561364 255 ntBASIC4.82□□□□□ -1.64
TO15178 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.82□□□□□ -1.64
TO15178 AC090312.1-201ENST00000580637 348 ntBASIC4.82□□□□□ -1.64
TO15178 SS18L2P2-201ENST00000583960 235 ntBASIC4.82□□□□□ -1.64
TO15178 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.82□□□□□ -1.64
TO15178 AC133794.1-201ENST00000602731 914 ntBASIC4.82□□□□□ -1.64
TO15178 ELOCP34-201ENST00000604436 327 ntBASIC4.82□□□□□ -1.64
TO15178 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.82□□□□□ -1.64
TO15178 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.82□□□□□ -1.64
TO15178 AC126915.2-201ENST00000610957 190 ntBASIC4.82□□□□□ -1.64
TO15178 AC116447.1-201ENST00000613153 453 ntBASIC4.82□□□□□ -1.64
TO15178 AC005156.1-201ENST00000613371 573 ntBASIC4.82□□□□□ -1.64
TO15178 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
TO15178 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.82□□□□□ -1.64
TO15178 AP004607.9-201ENST00000618202 316 ntBASIC4.82□□□□□ -1.64
TO15178 AC118658.2-201ENST00000618697 459 ntBASIC4.82□□□□□ -1.64
TO15178 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.82□□□□□ -1.64
TO15178 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.82□□□□□ -1.64
TO15178 AL590396.2-201ENST00000636511 1041 ntBASIC4.82□□□□□ -1.64
TO15178 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TO15178 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
TO15178 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TO15178 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.82□□□□□ -1.64
TO15178 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.82□□□□□ -1.64
TO15178 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
TO15178 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TO15178 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.82□□□□□ -1.64
TO15178 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
TO15178 AC073136.1-201ENST00000449426 2884 ntBASIC4.82□□□□□ -1.64
TO15178 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TO15178 AL590763.1-201ENST00000398297 1545 ntBASIC4.82□□□□□ -1.64
TO15178 PANDAR-201ENST00000629595 1506 ntBASIC4.82□□□□□ -1.64
TO15178 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
TO15178 MAPK10-349ENST00000641767 3661 ntBASIC4.82□□□□□ -1.64
TO15178 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms