Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 VDAC2P1-201ENST00000399358 958 ntBASIC4.36□□□□□ -1.71
UPK1AO00322 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.36□□□□□ -1.71
UPK1AO00322 GSTM3P2-201ENST00000412746 530 ntBASIC4.36□□□□□ -1.71
UPK1AO00322 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.36□□□□□ -1.71
UPK1AO00322 AC004690.1-201ENST00000418216 328 ntBASIC4.36□□□□□ -1.71
UPK1AO00322 AC140479.3-201ENST00000418944 1126 ntBASIC4.36□□□□□ -1.71
UPK1AO00322 OR2X1P-201ENST00000421144 687 ntBASIC4.36□□□□□ -1.71
UPK1AO00322 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.36□□□□□ -1.71
UPK1AO00322 AC008072.1-201ENST00000434254 824 ntBASIC4.36□□□□□ -1.71
UPK1AO00322 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.36□□□□□ -1.71
UPK1AO00322 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.36□□□□□ -1.71
UPK1AO00322 RPL32P9-201ENST00000487963 407 ntBASIC4.36□□□□□ -1.71
UPK1AO00322 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.36□□□□□ -1.71
UPK1AO00322 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.36□□□□□ -1.71
UPK1AO00322 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.36□□□□□ -1.71
UPK1AO00322 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.36□□□□□ -1.71
UPK1AO00322 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.36□□□□□ -1.71
UPK1AO00322 AL110118.1-201ENST00000553543 400 ntBASIC4.36□□□□□ -1.71
UPK1AO00322 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.36□□□□□ -1.71
UPK1AO00322 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.36□□□□□ -1.71
UPK1AO00322 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.36□□□□□ -1.71
UPK1AO00322 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.36□□□□□ -1.71
UPK1AO00322 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.36□□□□□ -1.71
UPK1AO00322 MIR6853-201ENST00000619642 74 ntBASIC4.36□□□□□ -1.71
UPK1AO00322 AL669942.2-201ENST00000620352 697 ntBASIC4.36□□□□□ -1.71
UPK1AO00322 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.36□□□□□ -1.71
UPK1AO00322 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
UPK1AO00322 SDAD1P1-202ENST00000524156 2051 ntBASIC4.36□□□□□ -1.71
UPK1AO00322 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
UPK1AO00322 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
UPK1AO00322 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.36□□□□□ -1.71
UPK1AO00322 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
UPK1AO00322 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
UPK1AO00322 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
UPK1AO00322 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.35□□□□□ -1.71
UPK1AO00322 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
UPK1AO00322 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
UPK1AO00322 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
UPK1AO00322 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
UPK1AO00322 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
UPK1AO00322 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
UPK1AO00322 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
UPK1AO00322 SNORA74A-201ENST00000364089 198 ntBASIC4.35□□□□□ -1.71
UPK1AO00322 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.35□□□□□ -1.71
UPK1AO00322 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.35□□□□□ -1.71
UPK1AO00322 RN7SKP267-201ENST00000410381 285 ntBASIC4.35□□□□□ -1.71
UPK1AO00322 AL356968.2-201ENST00000412769 1257 ntBASIC4.35□□□□□ -1.71
UPK1AO00322 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
UPK1AO00322 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.35□□□□□ -1.71
UPK1AO00322 AL590762.4-201ENST00000425885 253 ntBASIC4.35□□□□□ -1.71
UPK1AO00322 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.35□□□□□ -1.71
UPK1AO00322 SKP1P3-201ENST00000429280 487 ntBASIC4.35□□□□□ -1.71
UPK1AO00322 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.35□□□□□ -1.71
UPK1AO00322 AC016831.4-201ENST00000438302 307 ntBASIC4.35□□□□□ -1.71
UPK1AO00322 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC4.35□□□□□ -1.71
UPK1AO00322 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.35□□□□□ -1.71
UPK1AO00322 RN7SL826P-201ENST00000479724 288 ntBASIC4.35□□□□□ -1.71
UPK1AO00322 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.35□□□□□ -1.71
UPK1AO00322 AC108022.1-201ENST00000493466 478 ntBASIC4.35□□□□□ -1.71
UPK1AO00322 AC008897.1-201ENST00000494006 347 ntBASIC4.35□□□□□ -1.71
UPK1AO00322 RNU2-30P-201ENST00000516209 141 ntBASIC4.35□□□□□ -1.71
UPK1AO00322 KCTD9P6-201ENST00000522306 950 ntBASIC4.35□□□□□ -1.71
UPK1AO00322 AC124068.1-201ENST00000563131 678 ntBASIC4.35□□□□□ -1.71
UPK1AO00322 UBE2FP2-201ENST00000566646 462 ntBASIC4.35□□□□□ -1.71
UPK1AO00322 MIR4436B2-201ENST00000581415 91 ntBASIC4.35□□□□□ -1.71
UPK1AO00322 MIR4436B1-201ENST00000583272 91 ntBASIC4.35□□□□□ -1.71
UPK1AO00322 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.35□□□□□ -1.71
UPK1AO00322 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.35□□□□□ -1.71
UPK1AO00322 AL161912.3-201ENST00000605404 628 ntBASIC4.35□□□□□ -1.71
UPK1AO00322 AL021707.7-201ENST00000607991 416 ntBASIC4.35□□□□□ -1.71
UPK1AO00322 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.35□□□□□ -1.71
UPK1AO00322 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.35□□□□□ -1.71
UPK1AO00322 Z98755.1-201ENST00000407015 1384 ntBASIC4.35□□□□□ -1.71
UPK1AO00322 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
UPK1AO00322 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
UPK1AO00322 AC120338.1-201ENST00000625074 1541 ntBASIC4.35□□□□□ -1.71
UPK1AO00322 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.35□□□□□ -1.71
UPK1AO00322 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
UPK1AO00322 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
UPK1AO00322 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
UPK1AO00322 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
UPK1AO00322 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
UPK1AO00322 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
UPK1AO00322 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
UPK1AO00322 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.71
UPK1AO00322 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.34□□□□□ -1.71
UPK1AO00322 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.34□□□□□ -1.71
UPK1AO00322 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.34□□□□□ -1.71
UPK1AO00322 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
UPK1AO00322 AC007394.1-201ENST00000421941 531 ntBASIC4.34□□□□□ -1.71
UPK1AO00322 MAPRE1P3-201ENST00000435438 796 ntBASIC4.34□□□□□ -1.71
UPK1AO00322 AC073648.4-201ENST00000442655 781 ntBASIC4.34□□□□□ -1.71
UPK1AO00322 AC092324.1-201ENST00000468671 324 ntBASIC4.34□□□□□ -1.71
UPK1AO00322 RPS26P28-201ENST00000470806 348 ntBASIC4.34□□□□□ -1.71
UPK1AO00322 RPL36AP41-201ENST00000493820 306 ntBASIC4.34□□□□□ -1.71
UPK1AO00322 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.34□□□□□ -1.71
UPK1AO00322 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.34□□□□□ -1.71
UPK1AO00322 OR51K1P-201ENST00000510214 950 ntBASIC4.34□□□□□ -1.71
UPK1AO00322 AP000859.1-201ENST00000525536 307 ntBASIC4.34□□□□□ -1.71
UPK1AO00322 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms