Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
DDX39AO00148 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
DDX39AO00148 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
DDX39AO00148 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
DDX39AO00148 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
DDX39AO00148 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
DDX39AO00148 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
DDX39AO00148 MIR133A2-201ENST00000347538 102 ntBASIC5.38□□□□□ -1.55
DDX39AO00148 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
DDX39AO00148 RNA5SP187-201ENST00000384400 119 ntBASIC5.38□□□□□ -1.55
DDX39AO00148 MIR7-1-201ENST00000384871 110 ntBASIC5.38□□□□□ -1.55
DDX39AO00148 RPS16P5-201ENST00000406501 404 ntBASIC5.38□□□□□ -1.55
DDX39AO00148 AL590139.1-201ENST00000416267 400 ntBASIC5.38□□□□□ -1.55
DDX39AO00148 BX510359.2-201ENST00000417920 305 ntBASIC5.38□□□□□ -1.55
DDX39AO00148 AL691447.1-201ENST00000419456 387 ntBASIC5.38□□□□□ -1.55
DDX39AO00148 RFESDP1-201ENST00000422350 461 ntBASIC5.38□□□□□ -1.55
DDX39AO00148 OR6K4P-201ENST00000423179 955 ntBASIC5.38□□□□□ -1.55
DDX39AO00148 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.38□□□□□ -1.55
DDX39AO00148 CYCSP11-201ENST00000436426 315 ntBASIC5.38□□□□□ -1.55
DDX39AO00148 RPL35AP21-201ENST00000437667 333 ntBASIC5.38□□□□□ -1.55
DDX39AO00148 CASP3P1-201ENST00000446037 609 ntBASIC5.38□□□□□ -1.55
DDX39AO00148 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC5.38□□□□□ -1.55
DDX39AO00148 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.38□□□□□ -1.55
DDX39AO00148 VN1R48P-201ENST00000448149 1036 ntBASIC5.38□□□□□ -1.55
DDX39AO00148 AC108751.3-201ENST00000461814 1020 ntBASIC5.38□□□□□ -1.55
DDX39AO00148 RN7SL517P-201ENST00000462240 305 ntBASIC5.38□□□□□ -1.55
DDX39AO00148 AC096741.1-201ENST00000472250 846 ntBASIC5.38□□□□□ -1.55
DDX39AO00148 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.38□□□□□ -1.55
DDX39AO00148 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.38□□□□□ -1.55
DDX39AO00148 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.38□□□□□ -1.55
DDX39AO00148 AL137072.1-201ENST00000603444 466 ntBASIC5.38□□□□□ -1.55
DDX39AO00148 AC022387.2-201ENST00000604050 448 ntBASIC5.38□□□□□ -1.55
DDX39AO00148 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
DDX39AO00148 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.38□□□□□ -1.55
DDX39AO00148 MTCO1P8-201ENST00000416914 1523 ntBASIC5.38□□□□□ -1.55
DDX39AO00148 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
DDX39AO00148 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
DDX39AO00148 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
DDX39AO00148 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
DDX39AO00148 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
DDX39AO00148 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
DDX39AO00148 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
DDX39AO00148 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.37□□□□□ -1.55
DDX39AO00148 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
DDX39AO00148 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
DDX39AO00148 MIR192-201ENST00000384915 110 ntBASIC5.37□□□□□ -1.55
DDX39AO00148 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
DDX39AO00148 MIR298-201ENST00000401212 88 ntBASIC5.37□□□□□ -1.55
DDX39AO00148 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.37□□□□□ -1.55
DDX39AO00148 RGS17P1-201ENST00000423358 553 ntBASIC5.37□□□□□ -1.55
DDX39AO00148 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.37□□□□□ -1.55
DDX39AO00148 CACYBPP1-201ENST00000438592 684 ntBASIC5.37□□□□□ -1.55
DDX39AO00148 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.37□□□□□ -1.55
DDX39AO00148 AL591623.2-201ENST00000449978 222 ntBASIC5.37□□□□□ -1.55
DDX39AO00148 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.37□□□□□ -1.55
DDX39AO00148 AC243772.1-201ENST00000451620 410 ntBASIC5.37□□□□□ -1.55
DDX39AO00148 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.37□□□□□ -1.55
DDX39AO00148 RPL10P17-201ENST00000453852 316 ntBASIC5.37□□□□□ -1.55
DDX39AO00148 AC079168.2-201ENST00000453977 416 ntBASIC5.37□□□□□ -1.55
DDX39AO00148 NDUFA12P1-201ENST00000455914 406 ntBASIC5.37□□□□□ -1.55
DDX39AO00148 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.37□□□□□ -1.55
DDX39AO00148 EIF2S2P4-201ENST00000461070 984 ntBASIC5.37□□□□□ -1.55
DDX39AO00148 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.37□□□□□ -1.55
DDX39AO00148 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.37□□□□□ -1.55
DDX39AO00148 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.37□□□□□ -1.55
DDX39AO00148 AC073073.1-201ENST00000493920 463 ntBASIC5.37□□□□□ -1.55
DDX39AO00148 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.37□□□□□ -1.55
DDX39AO00148 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.37□□□□□ -1.55
DDX39AO00148 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.37□□□□□ -1.55
DDX39AO00148 SNORA70.11-201ENST00000515987 138 ntBASIC5.37□□□□□ -1.55
DDX39AO00148 SNORA70.13-201ENST00000516116 138 ntBASIC5.37□□□□□ -1.55
DDX39AO00148 Y_RNA.719-201ENST00000517156 106 ntBASIC5.37□□□□□ -1.55
DDX39AO00148 AC067904.2-201ENST00000517322 1283 ntBASIC5.37□□□□□ -1.55
DDX39AO00148 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.37□□□□□ -1.55
DDX39AO00148 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.37□□□□□ -1.55
DDX39AO00148 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.37□□□□□ -1.55
DDX39AO00148 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.37□□□□□ -1.55
DDX39AO00148 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.37□□□□□ -1.55
DDX39AO00148 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.37□□□□□ -1.55
DDX39AO00148 AP000346.3-201ENST00000622821 210 ntBASIC5.37□□□□□ -1.55
DDX39AO00148 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.37□□□□□ -1.55
DDX39AO00148 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.37□□□□□ -1.55
DDX39AO00148 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.37□□□□□ -1.55
DDX39AO00148 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.37□□□□□ -1.55
DDX39AO00148 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.37□□□□□ -1.55
DDX39AO00148 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
DDX39AO00148 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.37□□□□□ -1.55
DDX39AO00148 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
DDX39AO00148 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
DDX39AO00148 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
DDX39AO00148 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.37□□□□□ -1.55
DDX39AO00148 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
DDX39AO00148 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
DDX39AO00148 SPATA2P1-201ENST00000431223 2055 ntBASIC5.36□□□□□ -1.55
DDX39AO00148 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.36□□□□□ -1.55
DDX39AO00148 A2MP1-204ENST00000566278 4130 ntBASIC5.36□□□□□ -1.55
DDX39AO00148 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.36□□□□□ -1.55
DDX39AO00148 AC093671.1-201ENST00000624981 2929 ntBASIC5.36□□□□□ -1.55
DDX39AO00148 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
DDX39AO00148 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms