Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 AC025574.1-201ENST00000554784 1653 ntBASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 AC005005.4-201ENST00000623789 16698 ntBASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 AC011493.1-201ENST00000596753 1632 ntBASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 RNA5SP132-201ENST00000364725 118 ntBASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 RNU6-932P-201ENST00000391108 106 ntBASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 SNORA17A-201ENST00000391185 133 ntBASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 AC234781.4-201ENST00000419384 244 ntBASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 AC108075.1-201ENST00000424692 529 ntBASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 AL450023.3-201ENST00000440592 271 ntBASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 TXNP5-201ENST00000441043 315 ntBASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 AL691482.1-201ENST00000453255 87 ntBASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 RN7SL443P-201ENST00000464331 290 ntBASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 AC068587.2-201ENST00000478386 781 ntBASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 GTF2F2P1-201ENST00000511083 675 ntBASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 EEF1A1P37-201ENST00000522748 715 ntBASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 NDUFB4P11-201ENST00000560510 395 ntBASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 FKBP1AP1-201ENST00000594588 318 ntBASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 VN1R87P-201ENST00000596706 487 ntBASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 AP002906.1-201ENST00000603405 233 ntBASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 AC073387.2-201ENST00000604797 784 ntBASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 AL035461.2-201ENST00000619201 524 ntBASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 AP001962.1-201ENST00000624114 559 ntBASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 SNORA17.5-201ENST00000630429 132 ntBASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 TCP11X1-202ENST00000622971 1372 ntBASIC5.16□□□□□ -1.58
TCRBV7S3A2A0A539 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
TCRBV7S3A2A0A539 MTCO1P18-201ENST00000455518 1419 ntBASIC5.15□□□□□ -1.58
TCRBV7S3A2A0A539 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TCRBV7S3A2A0A539 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.15□□□□□ -1.58
TCRBV7S3A2A0A539 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.15□□□□□ -1.58
TCRBV7S3A2A0A539 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
TCRBV7S3A2A0A539 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TCRBV7S3A2A0A539 PANDAR-201ENST00000629595 1506 ntBASIC5.15□□□□□ -1.58
TCRBV7S3A2A0A539 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 RNU6-236P-201ENST00000363886 106 ntBASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 RN7SKP15-201ENST00000364742 309 ntBASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 HMGB1P13-201ENST00000406019 642 ntBASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 RNA5SP178-201ENST00000410380 128 ntBASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 RN7SKP59-201ENST00000410520 314 ntBASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 HMGB3P31-201ENST00000413333 595 ntBASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 AL592310.1-201ENST00000414330 671 ntBASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 NANOGP5-201ENST00000424456 877 ntBASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 AC097499.1-201ENST00000444277 208 ntBASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 AC092685.1-201ENST00000447960 1243 ntBASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 OR52E7P-201ENST00000452394 933 ntBASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 RPS17P2-201ENST00000461663 408 ntBASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 AC009127.1-201ENST00000467090 155 ntBASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 RN7SL441P-201ENST00000492388 296 ntBASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 AC073073.1-201ENST00000493920 463 ntBASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 RNU6-1004P-201ENST00000516584 111 ntBASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 HIGD1AP18-201ENST00000520730 278 ntBASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 AC116553.2-201ENST00000564203 463 ntBASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 MIR4789-201ENST00000577469 82 ntBASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.15□□□□□ -1.59
TCRBV7S3A2A0A539 AL049844.2-201ENST00000604280 628 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms