Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 RPL32P3-201ENST00000359025 275 ntBASIC4.9□□□□□ -1.63
SMIM28A0A1B0GU29 AL592291.1-201ENST00000403830 352 ntBASIC4.9□□□□□ -1.63
SMIM28A0A1B0GU29 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.9□□□□□ -1.63
SMIM28A0A1B0GU29 AC004690.1-201ENST00000418216 328 ntBASIC4.9□□□□□ -1.63
SMIM28A0A1B0GU29 DPPA2P2-201ENST00000418220 897 ntBASIC4.9□□□□□ -1.63
SMIM28A0A1B0GU29 OR2AH1P-201ENST00000425717 928 ntBASIC4.9□□□□□ -1.63
SMIM28A0A1B0GU29 AC073143.1-201ENST00000436316 395 ntBASIC4.9□□□□□ -1.63
SMIM28A0A1B0GU29 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.9□□□□□ -1.63
SMIM28A0A1B0GU29 CR383656.1-201ENST00000484916 377 ntBASIC4.9□□□□□ -1.63
SMIM28A0A1B0GU29 AC026979.1-201ENST00000492525 396 ntBASIC4.9□□□□□ -1.63
SMIM28A0A1B0GU29 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.63
SMIM28A0A1B0GU29 OR8G5-201ENST00000524943 1041 ntBASIC4.9□□□□□ -1.63
SMIM28A0A1B0GU29 AC005520.3-201ENST00000602874 370 ntBASIC4.9□□□□□ -1.63
SMIM28A0A1B0GU29 AL445423.1-201ENST00000609941 536 ntBASIC4.9□□□□□ -1.63
SMIM28A0A1B0GU29 LINC01808-202ENST00000641680 1116 ntBASIC4.9□□□□□ -1.63
SMIM28A0A1B0GU29 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.9□□□□□ -1.63
SMIM28A0A1B0GU29 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SMIM28A0A1B0GU29 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
SMIM28A0A1B0GU29 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.9□□□□□ -1.63
SMIM28A0A1B0GU29 AL031595.2-201ENST00000624215 19071 ntBASIC4.9□□□□□ -1.63
SMIM28A0A1B0GU29 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 PROS2P-201ENST00000474651 1951 ntBASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 AL022322.2-201ENST00000624072 20397 ntBASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 FAM3C2-201ENST00000312214 681 ntBASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 RNU1-83P-201ENST00000363426 164 ntBASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 NPM1P37-201ENST00000403105 874 ntBASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 TMSB10P2-201ENST00000416049 131 ntBASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 CHIAP3-201ENST00000423668 1133 ntBASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 RPL21P43-201ENST00000425440 472 ntBASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 RPS12P10-201ENST00000427031 377 ntBASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 AC023141.6-201ENST00000429418 337 ntBASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 RPL23AP43-201ENST00000446445 471 ntBASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 RPS23P7-201ENST00000466210 444 ntBASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 NIP7P2-201ENST00000485801 544 ntBASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 AC020937.1-201ENST00000519677 1013 ntBASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 TRAV11-201ENST00000539512 339 ntBASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 AC010615.3-201ENST00000597319 394 ntBASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 OR2L1P-202ENST00000641567 1023 ntBASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 CPHL1P-201ENST00000461341 3407 ntBASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 AL022393.1-201ENST00000625142 1677 ntBASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.89□□□□□ -1.63
SMIM28A0A1B0GU29 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.88□□□□□ -1.63
SMIM28A0A1B0GU29 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SMIM28A0A1B0GU29 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SMIM28A0A1B0GU29 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
SMIM28A0A1B0GU29 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SMIM28A0A1B0GU29 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
SMIM28A0A1B0GU29 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
SMIM28A0A1B0GU29 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.88□□□□□ -1.63
SMIM28A0A1B0GU29 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
SMIM28A0A1B0GU29 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.88□□□□□ -1.63
SMIM28A0A1B0GU29 RAD23BP1-201ENST00000421404 1227 ntBASIC4.88□□□□□ -1.63
SMIM28A0A1B0GU29 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.88□□□□□ -1.63
SMIM28A0A1B0GU29 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.88□□□□□ -1.63
SMIM28A0A1B0GU29 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.88□□□□□ -1.63
SMIM28A0A1B0GU29 TPT1P12-201ENST00000448968 492 ntBASIC4.88□□□□□ -1.63
SMIM28A0A1B0GU29 MORF4L1P4-201ENST00000450245 976 ntBASIC4.88□□□□□ -1.63
SMIM28A0A1B0GU29 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.88□□□□□ -1.63
SMIM28A0A1B0GU29 AC011276.1-201ENST00000469688 323 ntBASIC4.88□□□□□ -1.63
SMIM28A0A1B0GU29 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.88□□□□□ -1.63
SMIM28A0A1B0GU29 AC023424.1-201ENST00000496058 459 ntBASIC4.88□□□□□ -1.63
SMIM28A0A1B0GU29 AC091917.2-201ENST00000505002 744 ntBASIC4.88□□□□□ -1.63
SMIM28A0A1B0GU29 IGLVIV-65-201ENST00000517313 360 ntBASIC4.88□□□□□ -1.63
SMIM28A0A1B0GU29 OR8A2P-201ENST00000528631 952 ntBASIC4.88□□□□□ -1.63
SMIM28A0A1B0GU29 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.88□□□□□ -1.63
SMIM28A0A1B0GU29 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SMIM28A0A1B0GU29 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.88□□□□□ -1.63
SMIM28A0A1B0GU29 ADAD1P2-201ENST00000588476 646 ntBASIC4.88□□□□□ -1.63
SMIM28A0A1B0GU29 AC090948.1-201ENST00000607464 549 ntBASIC4.88□□□□□ -1.63
SMIM28A0A1B0GU29 NF1P10-201ENST00000613227 742 ntBASIC4.88□□□□□ -1.63
SMIM28A0A1B0GU29 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.88□□□□□ -1.63
SMIM28A0A1B0GU29 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SMIM28A0A1B0GU29 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SMIM28A0A1B0GU29 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SMIM28A0A1B0GU29 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SMIM28A0A1B0GU29 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SMIM28A0A1B0GU29 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 520.4 ms