Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 RPS27AP18-201ENST00000515536 459 ntBASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 PCNPP1-201ENST00000552501 511 ntBASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 AC018552.1-201ENST00000562099 811 ntBASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 AC020910.3-201ENST00000603701 874 ntBASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 AC005084.1-201ENST00000605160 304 ntBASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 AL121932.1-201ENST00000605542 214 ntBASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 AC007497.1-201ENST00000610421 561 ntBASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 CASC19-222ENST00000641321 1173 ntBASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 AC027228.2-201ENST00000567141 2154 ntBASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 CR382285.2-201ENST00000624662 1495 ntBASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 AL645733.1-201ENST00000402250 217 ntBASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 AL589994.1-201ENST00000404962 340 ntBASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 AC007559.1-201ENST00000428736 355 ntBASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 AC093414.1-201ENST00000434712 514 ntBASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 RPL23AP65-201ENST00000475608 468 ntBASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 RPL7P16-201ENST00000479738 738 ntBASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 AC098583.1-201ENST00000480875 255 ntBASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 TRBV8-1-201ENST00000481590 279 ntBASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 RNU4-18P-201ENST00000516751 149 ntBASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 BUD31P1-201ENST00000521828 359 ntBASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 AC069240.1-201ENST00000548774 375 ntBASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 BGLT3-201ENST00000564523 994 ntBASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 MTND6P33-201ENST00000571794 183 ntBASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 AC133644.2-201ENST00000608142 540 ntBASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 AP000542.2-201ENST00000623199 6179 ntBASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 AC009643.2-201ENST00000603543 1448 ntBASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.37□□□□□ -1.71
TRAPPC4Q9Y296 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 AP001002.1-201ENST00000625148 1513 ntBASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 MIR921-201ENST00000401133 56 ntBASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 AL109941.1-201ENST00000401925 229 ntBASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 OR2AM1P-201ENST00000422137 422 ntBASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 RGS17P1-201ENST00000423358 553 ntBASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 PSMD10P3-201ENST00000437000 448 ntBASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 SUMO2P1-206ENST00000445436 284 ntBASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 AL591363.1-201ENST00000450091 483 ntBASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 OR7L1P-201ENST00000456181 380 ntBASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 snoU13.20-201ENST00000459180 104 ntBASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 AC006967.1-201ENST00000467608 589 ntBASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 NIP7P2-201ENST00000485801 544 ntBASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 AL133372.1-201ENST00000493565 745 ntBASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 RNU6-709P-201ENST00000517257 104 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms