Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC091979.2-201ENST00000607514 214 ntBASIC5.78□□□□□ -1.48
SCN11AQ9UI33 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.77□□□□□ -1.48
SCN11AQ9UI33 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SCN11AQ9UI33 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.77□□□□□ -1.49
SCN11AQ9UI33 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
SCN11AQ9UI33 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
SCN11AQ9UI33 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SCN11AQ9UI33 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
SCN11AQ9UI33 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.77□□□□□ -1.49
SCN11AQ9UI33 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.77□□□□□ -1.49
SCN11AQ9UI33 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SCN11AQ9UI33 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
SCN11AQ9UI33 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.77□□□□□ -1.49
SCN11AQ9UI33 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
SCN11AQ9UI33 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SCN11AQ9UI33 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SCN11AQ9UI33 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SCN11AQ9UI33 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SCN11AQ9UI33 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SCN11AQ9UI33 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.77□□□□□ -1.49
SCN11AQ9UI33 RNU1-64P-201ENST00000365443 163 ntBASIC5.77□□□□□ -1.49
SCN11AQ9UI33 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SCN11AQ9UI33 RPL21P65-201ENST00000406094 466 ntBASIC5.77□□□□□ -1.49
SCN11AQ9UI33 SNORA74C-2-201ENST00000411179 201 ntBASIC5.77□□□□□ -1.49
SCN11AQ9UI33 SNRPFP1-201ENST00000414761 252 ntBASIC5.77□□□□□ -1.49
SCN11AQ9UI33 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.77□□□□□ -1.49
SCN11AQ9UI33 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SCN11AQ9UI33 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.77□□□□□ -1.49
SCN11AQ9UI33 RN7SL303P-201ENST00000469773 251 ntBASIC5.77□□□□□ -1.49
SCN11AQ9UI33 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.77□□□□□ -1.49
SCN11AQ9UI33 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.77□□□□□ -1.49
SCN11AQ9UI33 RNA5SP446-201ENST00000515955 82 ntBASIC5.77□□□□□ -1.49
SCN11AQ9UI33 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.77□□□□□ -1.49
SCN11AQ9UI33 RN7SL703P-201ENST00000578485 302 ntBASIC5.77□□□□□ -1.49
SCN11AQ9UI33 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.77□□□□□ -1.49
SCN11AQ9UI33 AC245389.1-201ENST00000605141 529 ntBASIC5.77□□□□□ -1.49
SCN11AQ9UI33 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.77□□□□□ -1.49
SCN11AQ9UI33 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.77□□□□□ -1.49
SCN11AQ9UI33 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.77□□□□□ -1.49
SCN11AQ9UI33 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SCN11AQ9UI33 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
SCN11AQ9UI33 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.77□□□□□ -1.49
SCN11AQ9UI33 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
SCN11AQ9UI33 AC104623.2-202ENST00000623477 4002 ntBASIC5.77□□□□□ -1.49
SCN11AQ9UI33 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.77□□□□□ -1.49
SCN11AQ9UI33 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SCN11AQ9UI33 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.77□□□□□ -1.49
SCN11AQ9UI33 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SCN11AQ9UI33 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.76□□□□□ -1.49
SCN11AQ9UI33 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SCN11AQ9UI33 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.76□□□□□ -1.49
SCN11AQ9UI33 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
SCN11AQ9UI33 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SCN11AQ9UI33 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SCN11AQ9UI33 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SCN11AQ9UI33 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SCN11AQ9UI33 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SCN11AQ9UI33 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
SCN11AQ9UI33 AL161909.1-201ENST00000397390 712 ntBASIC5.76□□□□□ -1.49
SCN11AQ9UI33 RN7SKP33-201ENST00000410942 340 ntBASIC5.76□□□□□ -1.49
SCN11AQ9UI33 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.76□□□□□ -1.49
SCN11AQ9UI33 RPEP2-201ENST00000432149 701 ntBASIC5.76□□□□□ -1.49
SCN11AQ9UI33 AC114495.1-201ENST00000441274 436 ntBASIC5.76□□□□□ -1.49
SCN11AQ9UI33 NUTF2P3-201ENST00000448540 384 ntBASIC5.76□□□□□ -1.49
SCN11AQ9UI33 RPS27AP17-201ENST00000463344 455 ntBASIC5.76□□□□□ -1.49
SCN11AQ9UI33 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.76□□□□□ -1.49
SCN11AQ9UI33 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.76□□□□□ -1.49
SCN11AQ9UI33 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
SCN11AQ9UI33 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.76□□□□□ -1.49
SCN11AQ9UI33 AC010476.1-201ENST00000519111 851 ntBASIC5.76□□□□□ -1.49
SCN11AQ9UI33 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.76□□□□□ -1.49
SCN11AQ9UI33 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.76□□□□□ -1.49
SCN11AQ9UI33 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.76□□□□□ -1.49
SCN11AQ9UI33 AC010547.7-201ENST00000570323 333 ntBASIC5.76□□□□□ -1.49
SCN11AQ9UI33 AL139254.3-201ENST00000641097 674 ntBASIC5.76□□□□□ -1.49
SCN11AQ9UI33 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SCN11AQ9UI33 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
SCN11AQ9UI33 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SCN11AQ9UI33 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.76□□□□□ -1.49
SCN11AQ9UI33 CASC19-255ENST00000641733 1385 ntBASIC5.75□□□□□ -1.49
SCN11AQ9UI33 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
SCN11AQ9UI33 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.75□□□□□ -1.49
SCN11AQ9UI33 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
SCN11AQ9UI33 AL121657.1-201ENST00000327215 531 ntBASIC5.75□□□□□ -1.49
SCN11AQ9UI33 EIF4A1P3-201ENST00000411521 244 ntBASIC5.75□□□□□ -1.49
SCN11AQ9UI33 AL157831.1-201ENST00000426134 473 ntBASIC5.75□□□□□ -1.49
SCN11AQ9UI33 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.75□□□□□ -1.49
SCN11AQ9UI33 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.75□□□□□ -1.49
SCN11AQ9UI33 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.75□□□□□ -1.49
SCN11AQ9UI33 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.75□□□□□ -1.49
SCN11AQ9UI33 AC090286.3-201ENST00000573133 187 ntBASIC5.75□□□□□ -1.49
SCN11AQ9UI33 AC093227.2-201ENST00000589357 285 ntBASIC5.75□□□□□ -1.49
SCN11AQ9UI33 AC006116.5-201ENST00000591936 559 ntBASIC5.75□□□□□ -1.49
SCN11AQ9UI33 AC005034.4-201ENST00000603612 899 ntBASIC5.75□□□□□ -1.49
SCN11AQ9UI33 AC006133.1-201ENST00000617106 264 ntBASIC5.75□□□□□ -1.49
SCN11AQ9UI33 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SCN11AQ9UI33 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SCN11AQ9UI33 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
SCN11AQ9UI33 AL355852.1-201ENST00000454081 1771 ntBASIC5.75□□□□□ -1.49
SCN11AQ9UI33 ATP5F1P2-201ENST00000398143 760 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms